RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 FGFR2P21802 821 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 KRT71Q3SY84 523 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 GLIS3Q8NEA6 775 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 MDM1Q8TC05 714 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 LSM14BQ9BX40 385 aaKnown RBP16.16■□□□□ 0.18
COL6A2-201ENST00000300527 DDX47Q9H0S4 455 aaKnown RBP16.16■□□□□ 0.18
COL6A2-201ENST00000300527 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 EPS15P42566 896 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 KCNB1Q14721 858 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
COL6A2-201ENST00000300527 PARP9Q8IXQ6 854 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 PIK3R5Q8WYR1 880 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 DDX20Q9UHI6 824 aaKnown RBP16.16■□□□□ 0.18
COL6A2-201ENST00000300527 RGPD5Q99666 1765 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 MYH13Q9UKX3 1938 aa16.16■□□□□ 0.18
COL6A2-201ENST00000300527 GMNCA6NCL1 334 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 EZRP15311 586 aaKnown RBP16.15■□□□□ 0.18
COL6A2-201ENST00000300527 CYB5D1Q6P9G0 228 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 SELENOSQ9BQE4 189 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 PCDHA4Q9UN74 947 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 TRAF5O00463 557 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 TNNC1P63316 161 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 PRPF4BQ13523 1007 aaKnown RBP16.15■□□□□ 0.18
COL6A2-201ENST00000300527 PPP1R7Q15435 360 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 CACNA2D3Q8IZS8 1091 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 C4orf32Q8N8J7 132 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 KIAA0895Q8NCT3 520 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 ERGIC2Q96RQ1 377 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 KBTBD4Q9NVX7 518 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 A6NNZ2 444 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 DNM1LO00429 736 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 PAX7P23759 505 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 KIF5BP33176 963 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 HSD17B3P37058 310 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 MAGOHP61326 146 aaKnown RBP16.15■□□□□ 0.18
COL6A2-201ENST00000300527 CHRNDQ07001 517 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 TUBB8Q3ZCM7 444 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 SPATS2Q86XZ4 545 aaKnown RBP16.15■□□□□ 0.18
COL6A2-201ENST00000300527 FAM133AQ8N9E0 248 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
COL6A2-201ENST00000300527 MAGOHBQ96A72 148 aaKnown RBP16.15■□□□□ 0.18
COL6A2-201ENST00000300527 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 HMGB1P1B2RPK0 211 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-201ENST00000300527 DDAH1O94760 285 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 SMTNP53814 917 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-201ENST00000300527 SFMBT2Q5VUG0 894 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 HIBCHQ6NVY1 386 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-201ENST00000300527 ARFGAP2Q8N6H7 521 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 PIGBQ92521 554 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 ECM29Q5VYK3 1845 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 MARCH6O60337 910 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 NAPAP54920 295 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 TFAP4Q01664 338 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 ITGB3BPQ13352 177 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-201ENST00000300527 CNNM4Q6P4Q7 775 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 CALML4Q96GE6 196 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 GGT7Q9UJ14 662 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 FBXL5Q9UKA1 691 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 EIF4E1BA6NMX2 242 aaKnown RBP16.14■□□□□ 0.17
COL6A2-201ENST00000300527 CLTAP09496 248 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 IL2RBP14784 551 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 DYNLL2Q96FJ2 89 aa16.14■□□□□ 0.17
COL6A2-201ENST00000300527 TPX2Q9ULW0 747 aaKnown RBP16.14■□□□□ 0.17
COL6A2-201ENST00000300527 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-201ENST00000300527 RCAN1P53805 252 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 RPS6KA1Q15418 735 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 MAN2A1Q16706 1144 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 OSBPL7Q9BZF2 842 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 GDF3Q9NR23 364 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 PCDHA6Q9UN73 950 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 PCDHA8Q9Y5H6 950 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 USP17L3A6NCW0 530 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 USP17L4A6NCW7 530 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 KLHL30Q0D2K2 578 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 PDXDC1Q6P996 788 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 ZNF662Q6ZS27 426 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 USP17L1Q7RTZ2 530 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 PNMA1Q8ND90 353 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 SEC16BQ96JE7 1060 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 SIK3Q9Y2K2 1263 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 OR52Z1P0C646 297 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 CDC25CP30307 473 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 FLT3P36888 993 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 AMPD3Q01432 767 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
COL6A2-201ENST00000300527 CCDC84Q86UT8 332 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-201ENST00000300527 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-201ENST00000300527 DAPK3O43293 454 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 MKNK2Q9HBH9 465 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 LUC7LQ9NQ29 371 aaKnown RBP16.12■□□□□ 0.17
COL6A2-201ENST00000300527 LEMD3Q9Y2U8 911 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms