RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 GGA2Q9UJY4 613 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 DISP2A7MBM2 1401 aa14.37□□□□□ -0.11
TVP23A-201ENST00000299866 MYH6P13533 1939 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 A0A1B0GUA9 196 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 HVCN1Q96D96 273 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 MTA3Q9BTC8 594 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 KBTBD4Q9NVX7 518 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 SIK3Q9Y2K2 1263 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 MSL1Q68DK7 614 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 ADGRA1Q86SQ6 560 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 CCDC50Q8IVM0 306 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 ZSCAN29Q8IWY8 852 aaPredicted RBP14.36□□□□□ -0.11
TVP23A-201ENST00000299866 BLIDQ8IZY5 108 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 RAPGEF5Q92565 580 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.36□□□□□ -0.11
TVP23A-201ENST00000299866 MTMR7Q9Y216 660 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 CCDC194A0A1B0GVG4 234 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 TMCO5BA8MYB1 307 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 HNRNPH3P31942 346 aaKnown RBP14.36□□□□□ -0.11
TVP23A-201ENST00000299866 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
TVP23A-201ENST00000299866 ERVK-9P63128 1117 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 INF2Q27J81 1249 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 FAM47AQ5JRC9 791 aa14.36□□□□□ -0.11
TVP23A-201ENST00000299866 NAIF1Q69YI7 327 aaPredicted RBP14.36□□□□□ -0.11
TVP23A-201ENST00000299866 HIBCHQ6NVY1 386 aaPredicted RBP14.36□□□□□ -0.11
TVP23A-201ENST00000299866 PHRF1Q9P1Y6 1649 aaKnown RBP14.35□□□□□ -0.11
TVP23A-201ENST00000299866 MRPL12P52815 198 aaKnown RBP14.35□□□□□ -0.11
TVP23A-201ENST00000299866 PPP1R7Q15435 360 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 SEMA6BQ9H3T3 888 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 TAF1DQ9H5J8 278 aaPredicted RBP14.35□□□□□ -0.11
TVP23A-201ENST00000299866 TSKSQ9UJT2 592 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 PNPLA7Q6ZV29 1317 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 DCDC2CA8MYV0 355 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 TNNC1P63316 161 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 EVX2Q03828 476 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 ZNF844Q08AG5 666 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 TRIM28Q13263 835 aaKnown RBP14.35□□□□□ -0.11
TVP23A-201ENST00000299866 CRYMQ14894 314 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 NLRP10Q86W26 655 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 PLCB1Q9NQ66 1216 aa14.35□□□□□ -0.11
TVP23A-201ENST00000299866 PJA2O43164 708 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 LCA5LO95447 670 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 CALM1P0DP23 149 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 CALM2P0DP24 149 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 CALM3P0DP25 149 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 KLRC1P26715 233 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 MAGOHP61326 146 aaKnown RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 UAP1Q16222 522 aaPredicted RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 MDM1Q8TC05 714 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 MAGOHBQ96A72 148 aaKnown RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 TRIM6Q9C030 488 aaPredicted RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 RNF14Q9UBS8 474 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 SLC12A6Q9UHW9 1150 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 MAGEB6P1A0A0J9YX57 407 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 KCNK3O14649 394 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 PPP2R2AP63151 447 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 DYNLL1P63167 89 aaKnown RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 SLC4A8Q2Y0W8 1093 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 GKAP1Q5VSY0 366 aaPredicted RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 CABP7Q86V35 215 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 TAF4BQ92750 862 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 AP1M1Q9BXS5 423 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 GOLPH3Q9H4A6 298 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 LMTK3Q96Q04 1460 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 SLC8A1P32418 973 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 RNF10Q8N5U6 811 aaKnown RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 TCP11Q8WWU5 503 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 BAP1Q92560 729 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 THOC1Q96FV9 657 aaKnown RBP14.34□□□□□ -0.11
TVP23A-201ENST00000299866 FBXL5Q9UKA1 691 aa14.34□□□□□ -0.11
TVP23A-201ENST00000299866 FGFR2P21802 821 aa14.33□□□□□ -0.11
TVP23A-201ENST00000299866 FLT3P36888 993 aa14.33□□□□□ -0.11
TVP23A-201ENST00000299866 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.11
TVP23A-201ENST00000299866 PDXDC1Q6P996 788 aa14.33□□□□□ -0.11
TVP23A-201ENST00000299866 PNMA8AQ86V59 439 aaPredicted RBP14.33□□□□□ -0.11
TVP23A-201ENST00000299866 NEUROG2Q9H2A3 272 aa14.33□□□□□ -0.11
TVP23A-201ENST00000299866 KIF1AQ12756 1690 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 BUB1BO60566 1050 aaPredicted RBP14.33□□□□□ -0.12
TVP23A-201ENST00000299866 CLTAP09496 248 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 KRT71Q3SY84 523 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 KIAA0895Q8NCT3 520 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 TBC1D5Q92609 795 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 CARD10Q9BWT7 1032 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 PACSIN1Q9BY11 444 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 NOD2Q9HC29 1040 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 CEP104O60308 925 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 TXNRD1Q16881 649 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 KIAA0753Q2KHM9 967 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 RUFY4Q6ZNE9 571 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 FMNL3Q8IVF7 1028 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 USP38Q8NB14 1042 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 STAMBPL1Q96FJ0 436 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 INPP4AQ96PE3 977 aaPredicted RBP14.33□□□□□ -0.12
TVP23A-201ENST00000299866 ATP6V0A4Q9HBG4 840 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms