RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 ESYT2A0FGR8 921 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 IQCA1LA6NCM1 817 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 TRIM75PA6NK02 468 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 TRAF5O00463 557 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 VCAM1P19320 739 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 NAPAP54920 295 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 PPP2R3AQ06190 1150 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 SAFBQ15424 915 aaKnown RBP eCLIP7.46□□□□□ -1.22
TMC1-201ENST00000297784 MAP1SQ66K74 1059 aaPredicted RBP7.46□□□□□ -1.22
TMC1-201ENST00000297784 CCDC91Q7Z6B0 441 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 EFCAB13Q8IY85 973 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 C4orf32Q8N8J7 132 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 CCDC34Q96HJ3 373 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 ZNF396Q96N95 335 aaPredicted RBP7.46□□□□□ -1.22
TMC1-201ENST00000297784 RANBP17Q9H2T7 1088 aaKnown RBP7.46□□□□□ -1.22
TMC1-201ENST00000297784 TMEM260Q9NX78 707 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 IFNKQ9P0W0 207 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 RAB21Q9UL25 225 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 VWA3AA6NCI4 1184 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 MEIS2O14770 477 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 IKBKBO14920 756 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 YEATS4O95619 227 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 MARCKSP29966 332 aaPredicted RBP7.46□□□□□ -1.22
TMC1-201ENST00000297784 IL17AQ16552 155 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 RILPL1Q5EBL4 403 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 MCTP2Q6DN12 878 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 MMS22LQ6ZRQ5 1243 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 RPAINQ86UA6 219 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 PNMA8AQ86V59 439 aaPredicted RBP7.46□□□□□ -1.22
TMC1-201ENST00000297784 HOOK2Q96ED9 719 aa7.46□□□□□ -1.22
TMC1-201ENST00000297784 BIN2Q9UBW5 565 aaPredicted RBP7.46□□□□□ -1.22
TMC1-201ENST00000297784 A0A1W2PQ27 194 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 A0A1W2PQ64 194 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 A0A1W2PQD8 194 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 SPTLC2O15270 562 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
TMC1-201ENST00000297784 GNL2Q13823 731 aaKnown RBP7.45□□□□□ -1.22
TMC1-201ENST00000297784 NCAPHQ15003 741 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 ADALQ6DHV7 355 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 GALNT17Q6IS24 598 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 HDXQ7Z353 690 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 FMR1NBQ8N0W7 255 aaPredicted RBP7.45□□□□□ -1.22
TMC1-201ENST00000297784 FAM177A1Q8N128 213 aaPredicted RBP7.45□□□□□ -1.22
TMC1-201ENST00000297784 LPAR1Q92633 364 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 CLIC6Q96NY7 704 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 RIC8AQ9NPQ8 531 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 PCDHA1Q9Y5I3 950 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 hCG_1984214I3L0E3 225 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 ARHGAP6O43182 974 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 CBFA2T2O43439 604 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 PPP6R2O75170 966 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 CALML3P27482 149 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 HMGCS2P54868 508 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 UBE2SQ16763 222 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 BEND6Q5SZJ8 279 aaPredicted RBP7.45□□□□□ -1.22
TMC1-201ENST00000297784 SHC4Q6S5L8 630 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 ZNF713Q8N859 430 aaPredicted RBP7.45□□□□□ -1.22
TMC1-201ENST00000297784 KIFC2Q96AC6 838 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 FAM107BQ9H098 131 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 HTTP42858 3142 aa7.45□□□□□ -1.22
TMC1-201ENST00000297784 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 IRF6O14896 467 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 WDR46O15213 610 aaKnown RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 NLRP12P59046 1061 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USH1GQ495M9 461 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 USP17L6PQ6QN14 398 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 MSANTD4Q8NCY6 345 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 CCDC148Q8NFR7 591 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 FAM71BQ8TC56 605 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 TBC1D5Q92609 795 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 C12orf42Q96LP6 360 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 SH2D4AQ9H788 454 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 NMRK2Q9NPI5 230 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 PICK1Q9NRD5 415 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 KIAA1468Q9P260 1216 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 FBXO2Q9UK22 296 aaPredicted RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 FEM1BQ9UK73 627 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 CEP350Q5VT06 3117 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 A0A087WUV0 522 aaPredicted RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 KIF1CO43896 1103 aaKnown RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 CCDC172P0C7W6 258 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 ME1P48163 572 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 MOGSQ13724 837 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 TUBB2AQ13885 445 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 ZNF174Q15697 407 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 INF2Q27J81 1249 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 TMEM139Q8IV31 216 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 FSIP1Q8NA03 581 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 KCNG4Q8TDN1 519 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 CRYGNQ8WXF5 182 aa7.44□□□□□ -1.22
TMC1-201ENST00000297784 MRPS27Q92552 414 aaKnown RBP7.44□□□□□ -1.22
TMC1-201ENST00000297784 TUBB2BQ9BVA1 445 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms