RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CPP00450 1065 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 SPDYE6P0CI01 402 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 SCG2P13521 617 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 SGO2Q562F6 1265 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 ZBTB33Q86T24 672 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 PLA2G4DQ86XP0 818 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 LARSQ9P2J5 1176 aaKnown RBP17.51■□□□□ 0.39
SSRP1-202ENST00000293880 MAPK4P31152 587 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 GSPT2Q8IYD1 628 aaKnown RBP17.51■□□□□ 0.39
SSRP1-202ENST00000293880 SPICE1Q8N0Z3 855 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 NOVA2Q9UNW9 492 aaKnown RBP17.51■□□□□ 0.39
SSRP1-202ENST00000293880 ZNF711Q9Y462 761 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 TMEM191BP0C7N4 346 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 ETF1P62495 437 aaKnown RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 SLFN12Q8IYM2 578 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 ZNF274Q96GC6 653 aaPredicted RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 ZSWIM6Q9HCJ5 1215 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 CCDC87Q9NVE4 849 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 F5H423 210 aaPredicted RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 MAP3K7O43318 606 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 TCP1P17987 556 aaKnown RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 RFX1P22670 979 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 PDIA3P30101 505 aaKnown RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 SNAP25P60880 206 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 SCOCQ9UIL1 159 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 LOC102724159A0A0B4J2E5 919 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 H7C1D1 291 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 ADORA1P30542 326 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 BASP1P80723 227 aaKnown RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.392e-9■■□□□ 13.3
SSRP1-202ENST00000293880 PWP2Q15269 919 aaKnown RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 PARP10Q53GL7 1025 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 CCNYQ8ND76 341 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 GPC4O75487 556 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 BTDP43251 543 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 Q3C1V9 767 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 ALKBH8Q96BT7 664 aaKnown RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 DYDC2Q96IM9 177 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 LONP1P36776 959 aaKnown RBP17.5■□□□□ 0.39
SSRP1-202ENST00000293880 MSH2P43246 934 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 ATP6V1E2Q96A05 226 aa17.5■□□□□ 0.39
SSRP1-202ENST00000293880 H0YIN7 160 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 KITP10721 976 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 ATP5JP18859 108 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 CDC25BP30305 580 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 DNAJC6O75061 913 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 WBP4O75554 376 aaKnown RBP17.49■□□□□ 0.39
SSRP1-202ENST00000293880 DNAJC8O75937 253 aaPredicted RBP17.49■□□□□ 0.39
SSRP1-202ENST00000293880 ZBTB8OSQ8IWT0 167 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
SSRP1-202ENST00000293880 H2AFZP0C0S5 128 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 H2AFVQ71UI9 128 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 KCNV2Q8TDN2 545 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 PARD3BQ8TEW8 1205 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 NHEJ1Q9H9Q4 299 aaPredicted RBP17.49■□□□□ 0.39
SSRP1-202ENST00000293880 HSP90AA5PQ58FG0 334 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 MFSD14BQ5SR56 506 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 DARS2Q6PI48 645 aaKnown RBP17.49■□□□□ 0.39
SSRP1-202ENST00000293880 PARD6BQ9BYG5 372 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 GRAMD4Q6IC98 578 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 CDKL2Q92772 493 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 HAUS4Q9H6D7 363 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 CDC23Q9UJX2 597 aa17.49■□□□□ 0.39
SSRP1-202ENST00000293880 SMAD1Q15797 465 aaKnown RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 NCAPGQ9BPX3 1015 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 SAMSN1Q9NSI8 373 aaKnown RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 SLC16A2P36021 539 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 DHX9Q08211 1270 aaKnown RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 HSPH1Q92598 858 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 CCDC195A0A1B0GUA6 201 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 KRT14P02533 472 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 PDHA1P08559 390 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 KIF11P52732 1056 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 SH3BGRP55822 239 aaPredicted RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 OSTNP61366 133 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 FGD4Q96M96 766 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 LZTS1Q9Y250 596 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 ATP10AO60312 1499 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 FGAP02671 866 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 CDC25AP30304 524 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 MFAP3P55082 362 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 SULF1Q8IWU6 871 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 CCDC138Q96M89 665 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 CARMIL3Q8ND23 1372 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 KCTD6Q8NC69 237 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 FBXO41Q8TF61 875 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
SSRP1-202ENST00000293880 UBN1Q9NPG3 1134 aa17.48■□□□□ 0.39
SSRP1-202ENST00000293880 LPXNO60711 386 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms