RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CPA1P15085 419 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 CST5P28325 142 aaPredicted RBP11.33□□□□□ -0.6
CCDC58-201ENST00000291458 TROAPQ12815 778 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 SNX17Q15036 470 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 NECTIN1Q15223 517 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 CCSAPQ6IQ19 270 aaPredicted RBP11.33□□□□□ -0.6
CCDC58-201ENST00000291458 FCHSD1Q86WN1 690 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 MCF2L2Q86YR7 1114 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 TRIM43Q96BQ3 446 aaPredicted RBP11.33□□□□□ -0.6
CCDC58-201ENST00000291458 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 DOCK5Q9H7D0 1870 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 MYH7BA7E2Y1 1941 aa11.33□□□□□ -0.6
CCDC58-201ENST00000291458 DCDC2CA8MYV0 355 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 OPLAHO14841 1288 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 ARIH2O95376 493 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 RAG1P15918 1043 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 KIF5BP33176 963 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 DUSP28Q4G0W2 176 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 IQSEC1Q6DN90 963 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 TDHQ8IZJ6 230 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 MORC4Q8TE76 937 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 TSEN34Q9BSV6 310 aaKnown RBP11.32□□□□□ -0.6
CCDC58-201ENST00000291458 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 TMEM39AQ9NV64 488 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
CCDC58-201ENST00000291458 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 B4DLN1 442 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 ZEB2O60315 1214 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
CCDC58-201ENST00000291458 ITGB8P26012 769 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 MRPL12P52815 198 aaKnown RBP11.31□□□□□ -0.6
CCDC58-201ENST00000291458 FGD1P98174 961 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 DNERQ8NFT8 737 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 NSUN6Q8TEA1 469 aaKnown RBP11.31□□□□□ -0.6
CCDC58-201ENST00000291458 SCFD2Q8WU76 684 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 MTMR8Q96EF0 704 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 RRP36Q96EU6 259 aaKnown RBP11.31□□□□□ -0.6
CCDC58-201ENST00000291458 TMEM87BQ96K49 555 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 NEK1Q96PY6 1258 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
CCDC58-201ENST00000291458 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
CCDC58-201ENST00000291458 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
CCDC58-201ENST00000291458 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
CCDC58-201ENST00000291458 POLR2MP0CAP2 368 aa11.3□□□□□ -0.6
CCDC58-201ENST00000291458 EDNRBP24530 442 aa11.3□□□□□ -0.6
CCDC58-201ENST00000291458 FAAP100Q0VG06 881 aa11.3□□□□□ -0.6
CCDC58-201ENST00000291458 TTLL4Q14679 1199 aa11.3□□□□□ -0.6
CCDC58-201ENST00000291458 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
CCDC58-201ENST00000291458 C9orf50Q5SZB4 431 aa11.3□□□□□ -0.6
CCDC58-201ENST00000291458 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
CCDC58-201ENST00000291458 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
CCDC58-201ENST00000291458 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
CCDC58-201ENST00000291458 MRVI1Q9Y6F6 885 aa11.3□□□□□ -0.6
CCDC58-201ENST00000291458 KLF18A0A0U1RQI7 1052 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 GOLGA8AA7E2F4 631 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 GOLGA8BA8MQT2 603 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 ARVCFO00192 962 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
CCDC58-201ENST00000291458 NR3C2P08235 984 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 BMP8BP34820 402 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 CPT1AP50416 773 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 HSD17B4P51659 736 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 STXBP2Q15833 593 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 C1orf53Q5VUE5 145 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 RGS22Q8NE09 1264 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 SMARCC2Q8TAQ2 1214 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 ELP1O95163 1332 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 MROH7Q68CQ1 1323 aa11.29□□□□□ -0.6
CCDC58-201ENST00000291458 LOC102724159A0A0B4J2E5 919 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 A0A1W2PPC1 479 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 ZNF286BP0CG31 522 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 CALM1P0DP23 149 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 CALM2P0DP24 149 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 CALM3P0DP25 149 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 LIFRP42702 1097 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 EPHB4P54760 987 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 PURAQ00577 322 aaKnown RBP11.28□□□□□ -0.6
CCDC58-201ENST00000291458 FPGSQ05932 587 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 PGM5Q15124 567 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 PWP2Q15269 919 aaKnown RBP11.28□□□□□ -0.6
CCDC58-201ENST00000291458 SHHQ15465 462 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 UBE2SQ16763 222 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 RTN1Q16799 776 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms