RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ANKRD40Q6AI12 368 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 KIAA0895Q8NCT3 520 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 CUEDC2Q9H467 287 aa20.07■□□□□ 0.8
CAPN1-201ENST00000279247 POTEFA5A3E0 1075 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 SOWAHDA6NJG2 315 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 NKRFO15226 690 aaKnown RBP eCLIP20.06■□□□□ 0.8
CAPN1-201ENST00000279247 CHMP2AO43633 222 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 POTEIP0CG38 1075 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 CAP2P40123 477 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 TBX2Q13207 712 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-201ENST00000279247 KCNB1Q14721 858 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 POTEGQ6S5H5 508 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 POTEEQ6S8J3 1075 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 TOGARAM2Q6ZUX3 1019 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 IRF2BP1Q8IU81 584 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 GPIHBP1Q8IV16 184 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 RAD54LQ92698 747 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 HOMER2Q9NSB8 354 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 ZNF541Q9H0D2 1346 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 AKR1B15C9JRZ8 316 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-201ENST00000279247 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-201ENST00000279247 MICALL2Q8IY33 904 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 C7orf25Q9BPX7 421 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 MAGEC2Q9UBF1 373 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-201ENST00000279247 KIF13BQ9NQT8 1826 aa20.06■□□□□ 0.8
CAPN1-201ENST00000279247 FXR1P51114 621 aaKnown RBP eCLIP20.05■□□□□ 0.8
CAPN1-201ENST00000279247 NAA30Q147X3 362 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-201ENST00000279247 CCDC112Q8NEF3 446 aa20.05■□□□□ 0.8
CAPN1-201ENST00000279247 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.05■□□□□ 0.8
CAPN1-201ENST00000279247 V9GYY5 206 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-201ENST00000279247 PDIA5Q14554 519 aa20.05■□□□□ 0.8
CAPN1-201ENST00000279247 PKD2L1Q9P0L9 805 aa20.05■□□□□ 0.8
CAPN1-201ENST00000279247 GCFC2P16383 781 aaKnown RBP20.05■□□□□ 0.8
CAPN1-201ENST00000279247 CT47A1Q5JQC4 288 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-201ENST00000279247 DLK2Q6UY11 383 aa20.05■□□□□ 0.8
CAPN1-201ENST00000279247 NYAP1Q6ZVC0 841 aa20.05■□□□□ 0.8
CAPN1-201ENST00000279247 TMEM139Q8IV31 216 aa20.05■□□□□ 0.8
CAPN1-201ENST00000279247 H7C1D1 291 aa20.04■□□□□ 0.8
CAPN1-201ENST00000279247 RNF225M0QZC1 329 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-201ENST00000279247 KRT18P05783 430 aaKnown RBP20.04■□□□□ 0.8
CAPN1-201ENST00000279247 P2RX5Q93086 422 aa20.04■□□□□ 0.8
CAPN1-201ENST00000279247 PCMTD1Q96MG8 357 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-201ENST00000279247 VCPKMTQ9H867 229 aa20.04■□□□□ 0.8
CAPN1-201ENST00000279247 B4DLN1 442 aa20.04■□□□□ 0.8
CAPN1-201ENST00000279247 ORC2Q13416 577 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-201ENST00000279247 MED24O75448 989 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 GYPCP04921 128 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 TERF1P54274 439 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 TTI2Q6NXR4 508 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 CNNM4Q6P4Q7 775 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 AGBL1Q96MI9 1066 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 GLT8D2Q9H1C3 349 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 STK17AQ9UEE5 414 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 DNAI1Q9UI46 699 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 MYL1P05976 194 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 MTIF2P46199 727 aaKnown RBP20.03■□□□□ 0.8
CAPN1-201ENST00000279247 USP11P51784 963 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 PRKG1Q13976 671 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 TRMT1LQ7Z2T5 733 aaKnown RBP20.03■□□□□ 0.8
CAPN1-201ENST00000279247 NELFCDQ8IXH7 590 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 DUSP9Q99956 384 aaKnown RBP20.03■□□□□ 0.8
CAPN1-201ENST00000279247 SYT17Q9BSW7 474 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 MAGEF1Q9HAY2 307 aa20.03■□□□□ 0.8
CAPN1-201ENST00000279247 INPP5BP32019 993 aa20.02■□□□□ 0.8
CAPN1-201ENST00000279247 PSMC6P62333 389 aa20.02■□□□□ 0.8
CAPN1-201ENST00000279247 SPAG1Q07617 926 aa20.02■□□□□ 0.8
CAPN1-201ENST00000279247 PABPC4Q13310 644 aaKnown RBP eCLIP20.02■□□□□ 0.87e-7■■□□□ 12
CAPN1-201ENST00000279247 AP3B2Q13367 1082 aa20.02■□□□□ 0.8
CAPN1-201ENST00000279247 LIMA1Q9UHB6 759 aaKnown RBP20.02■□□□□ 0.8
CAPN1-201ENST00000279247 CNOT7Q9UIV1 285 aaKnown RBP20.02■□□□□ 0.8
CAPN1-201ENST00000279247 ARHGAP6O43182 974 aa20.02■□□□□ 0.8
CAPN1-201ENST00000279247 TNIP1Q15025 636 aa20.02■□□□□ 0.8
CAPN1-201ENST00000279247 PPP2R2CQ9Y2T4 447 aa20.02■□□□□ 0.8
CAPN1-201ENST00000279247 ASNSP08243 561 aa20.02■□□□□ 0.79
CAPN1-201ENST00000279247 GPBP1Q86WP2 473 aa20.02■□□□□ 0.79
CAPN1-201ENST00000279247 KIF18AQ8NI77 898 aa20.02■□□□□ 0.79
CAPN1-201ENST00000279247 TANGO6Q9C0B7 1094 aa20.02■□□□□ 0.79
CAPN1-201ENST00000279247 SEMA6BQ9H3T3 888 aa20.02■□□□□ 0.79
CAPN1-201ENST00000279247 A0A0U1RQJ8 604 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 TPM1P09493 284 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 CCNE1P24864 410 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 KLK7P49862 253 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 BTNL9Q6UXG8 535 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 FAM83AQ86UY5 434 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 CHURC1Q8WUH1 139 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 ATRIPQ8WXE1 791 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 CNOT6LQ96LI5 555 aaKnown RBP20.01■□□□□ 0.79
CAPN1-201ENST00000279247 FGFBP2Q9BYJ0 223 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 KCNMB3Q9NPA1 279 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 LZTFL1Q9NQ48 299 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 PLA2G4BP0C869 781 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 NBPF12Q5TAG4 269 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-201ENST00000279247 UNC13DQ70J99 1090 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 TUBGCP2Q9BSJ2 902 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 RGL1Q9NZL6 768 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 HACL1Q9UJ83 578 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 ARFGEF1Q9Y6D6 1849 aa20.01■□□□□ 0.79
CAPN1-201ENST00000279247 DDX39AO00148 427 aaKnown RBP20■□□□□ 0.79
CAPN1-201ENST00000279247 DYNC1I1O14576 645 aa20■□□□□ 0.79
CAPN1-201ENST00000279247 MSH4O15457 936 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms