RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ANKRD23Q86SG2 305 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 GALNT15Q8N3T1 639 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 KRI1Q8N9T8 703 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 CTAGE1Q96RT6 745 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 INCENPQ9NQS7 918 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 IQSEC3Q9UPP2 1182 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 LIN7AO14910 233 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 NCK2O43639 380 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 RIPK1Q13546 671 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 GKAP1Q5VSY0 366 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 DNAJC14Q6Y2X3 702 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 TBC1D10CQ8IV04 446 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 RBM41Q96IZ5 413 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 ZNF512BQ96KM6 892 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 EPB41L5Q9HCM4 733 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 SLC12A4Q9UP95 1085 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 CTNND2Q9UQB3 1225 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 C2CD2Q9Y426 696 aa17.33■□□□□ 0.36
CTDSP1-201ENST00000273062 MYH7P12883 1935 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 SRRM3A6NNA2 597 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 PRC1O43663 620 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 KRT86O43790 486 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 GUCY2DQ02846 1103 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 CDC37Q16543 378 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 NUGGCQ68CJ6 796 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 CD302Q8IX05 232 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 MB21D2Q8IYB1 491 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 SPATA5Q8NB90 893 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 SPATA20Q8TB22 786 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 PHKBQ93100 1093 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 MS4A14Q96JA4 679 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 ALG1Q9BT22 464 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 TMBIM4Q9HC24 238 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 BLOC1S6Q9UL45 172 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 TCRBV5S4A2TA0A5A2 114 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 ANO9A1A5B4 782 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 CCT8L1PA6NM43 557 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 GHRP10912 638 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 DRD4P21917 467 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 TEKT4Q8WW24 435 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 NGLY1Q96IV0 654 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 PLEKHG4BQ96PX9 1271 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 OCEL1Q9H607 264 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 MLXIPQ9HAP2 919 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 LRRC4CQ9HCJ2 640 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 PCMTD2Q9NV79 361 aa17.32■□□□□ 0.36
CTDSP1-201ENST00000273062 A0A087X0B3 334 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 ZNF213O14771 459 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 ZPR1O75312 459 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 ALDH5A1P51649 535 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 COPB1P53618 953 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 PAK2Q13177 524 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 ERFEQ4G0M1 354 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 CPLX4Q7Z7G2 160 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 SLC5A1P13866 664 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 MAGEB6Q8N7X4 407 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 TRIML1Q8N9V2 468 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 ATL2Q8NHH9 583 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 GGT7Q9UJ14 662 aa17.31■□□□□ 0.36
CTDSP1-201ENST00000273062 RREB1Q92766 1687 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 CDKL5O76039 1030 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 MAGEA10P43363 369 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 CCDC152Q4G0S7 254 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 PARP10Q53GL7 1025 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 MDM1Q8TC05 714 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 TAF1DQ9H5J8 278 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 HEXIM1O94992 359 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 IMPDH2P12268 514 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 ALADP13716 330 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 TNFRSF8P28908 595 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 MAGEA8P43361 318 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 UBXN1Q04323 297 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 CHRNDQ07001 517 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 ZNF268Q14587 947 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 ZNF572Q7Z3I7 529 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 MYLK4Q86YV6 388 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 GPIHBP1Q8IV16 184 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 STAMQ92783 540 aa17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 PURBQ96QR8 312 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-201ENST00000273062 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 TOM1O60784 492 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 TMEM62Q0P6H9 643 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 SLMAPQ14BN4 828 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 ANO7Q6IWH7 933 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 FNBP4Q8N3X1 1017 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 CCHCR1Q8TD31 782 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 SYT15Q9BQS2 421 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms