RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 ZNF569Q5MCW4 686 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 WDR93Q6P2C0 686 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 CCDC84Q86UT8 332 aaPredicted RBP11.26□□□□□ -0.61
CPNE9-201ENST00000273027 CABP7Q86V35 215 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 RASAL3Q86YV0 1011 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 RASSF8Q8NHQ8 419 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 TRIM47Q96LD4 638 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 ERGIC2Q96RQ1 377 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 NUCKS1Q9H1E3 243 aaKnown RBP11.26□□□□□ -0.61
CPNE9-201ENST00000273027 MRPL44Q9H9J2 332 aaKnown RBP11.26□□□□□ -0.61
CPNE9-201ENST00000273027 IL17RBQ9NRM6 502 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 EXOC1Q9NV70 894 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
CPNE9-201ENST00000273027 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 EIF3CLB5ME19 914 aaKnown RBP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 KLRF2D3W0D1 207 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 C6orf229H3BNL8 230 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 MAP2K7O14733 419 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 KLRC4O43908 158 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 IL1R1P14778 569 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 PRLRP16471 622 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 RASA1P20936 1047 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 RPS12P25398 132 aaKnown RBP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 HNRNPH3P31942 346 aaKnown RBP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 CYP2C19P33261 490 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 ITIH3Q06033 890 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 KARSQ15046 597 aaKnown RBP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 IL17AQ16552 155 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 FKBP15Q5T1M5 1219 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 TTI2Q6NXR4 508 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 ZSCAN29Q8IWY8 852 aaPredicted RBP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 P2RX5Q93086 422 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 EIF3CQ99613 913 aaKnown RBP11.25□□□□□ -0.61
CPNE9-201ENST00000273027 MTRQ99707 1265 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 VPS16Q9H269 839 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 VIPAS39Q9H9C1 493 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 RIC8AQ9NPQ8 531 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 MYO6Q9UM54 1294 aa11.25□□□□□ -0.61
CPNE9-201ENST00000273027 PSME4Q14997 1843 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 USO1O60763 962 aaKnown RBP11.24□□□□□ -0.61
CPNE9-201ENST00000273027 CLSTN1O94985 981 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 USP17L8P0C7I0 530 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 GCFC2P16383 781 aaKnown RBP11.24□□□□□ -0.61
CPNE9-201ENST00000273027 CCT6AP40227 531 aaKnown RBP11.24□□□□□ -0.61
CPNE9-201ENST00000273027 NAPAP54920 295 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 LRRC63Q05C16 580 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 NAALADL2Q58DX5 795 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 HSP90AA4PQ58FG1 418 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 PAPD7Q5XG87 772 aaKnown RBP11.24□□□□□ -0.61
CPNE9-201ENST00000273027 FBXO46Q6PJ61 603 aaPredicted RBP11.24□□□□□ -0.61
CPNE9-201ENST00000273027 SV2BQ7L1I2 683 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 SLC35F6Q8N357 371 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 CSGALNACT2Q8N6G5 542 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 CCDC155Q8N6L0 562 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 CPLX3Q8WVH0 158 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 EYA3Q99504 573 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 TUBGCP2Q9BSJ2 902 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 FUT8Q9BYC5 575 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 TRIM9Q9C026 710 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 RIOX1Q9H6W3 641 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 LZTFL1Q9NQ48 299 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 TAB2Q9NYJ8 693 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 SWAP70Q9UH65 585 aa11.24□□□□□ -0.61
CPNE9-201ENST00000273027 CEP290O15078 2479 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 hCG_1642624A0A1W2PR95 340 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 GPR25O00155 361 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 WNT7AO00755 349 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 FANCGO15287 622 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 ECE2O60344 883 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 NMT2O60551 498 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 CDK8P49336 464 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 ERVK-24P63145 666 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 SMC1AQ14683 1233 aaKnown RBP11.23□□□□□ -0.61
CPNE9-201ENST00000273027 LONRF2Q1L5Z9 754 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 MOB2Q70IA6 237 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 UNC13DQ70J99 1090 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 IRF2BP1Q8IU81 584 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 GUF1Q8N442 669 aaKnown RBP11.23□□□□□ -0.61
CPNE9-201ENST00000273027 DESI2Q9BSY9 194 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 TSPYL1Q9H0U9 437 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 BLZF1Q9H2G9 400 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 MED4Q9NPJ6 270 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 LUC7LQ9NQ29 371 aaKnown RBP11.23□□□□□ -0.61
CPNE9-201ENST00000273027 CWC15Q9P013 229 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms