RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PITPNM2Q9BZ72 1349 aa12.46□□□□□ -0.42
MSH3-201ENST00000265081 EIF3CLB5ME19 914 aaKnown RBP12.45□□□□□ -0.42
MSH3-201ENST00000265081 PLA2G6O60733 806 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 SREBF1P36956 1147 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 FAM193AP78312 1265 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 ASIC1P78348 528 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 ACRBPQ8NEB7 543 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 EIF3CQ99613 913 aaKnown RBP12.45□□□□□ -0.42
MSH3-201ENST00000265081 CARD6Q9BX69 1037 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 VAT1LQ9HCJ6 419 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 POTEMA6NI47 508 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 ABL1P00519 1130 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 SLC12A3P55017 1021 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 HNRNPLLQ8WVV9 542 aaKnown RBP12.45□□□□□ -0.42
MSH3-201ENST00000265081 GMLQ99445 158 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 CHP1Q99653 195 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 PGAP2Q9UHJ9 254 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 B4DLN1 442 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 JAG1P78504 1218 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 MAP3K10Q02779 954 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 ZNF772Q68DY9 489 aaPredicted RBP12.45□□□□□ -0.42
MSH3-201ENST00000265081 SRGAP1Q7Z6B7 1085 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
MSH3-201ENST00000265081 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
MSH3-201ENST00000265081 EPN1Q9Y6I3 576 aaPredicted RBP12.45□□□□□ -0.42
MSH3-201ENST00000265081 URI1O94763 535 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 CERKLQ49MI3 558 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 VWA3BQ502W6 1294 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 KCTD1Q719H9 257 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 ZNF572Q7Z3I7 529 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 DDX12PQ92771 950 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 PLIN2Q99541 437 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 KCTD10Q9H3F6 313 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 YDJCA8MPS7 323 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 F8W031 263 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 RRP1BQ14684 758 aaKnown RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 SHROOM1Q2M3G4 852 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 PAPD7Q5XG87 772 aaKnown RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 HAUS4Q9H6D7 363 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 DBNDD1Q9H9R9 158 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.44□□□□□ -0.42
MSH3-201ENST00000265081 PLAGL2Q9UPG8 496 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 V9GYY5 206 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 KIF5CO60282 957 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 ASTE1Q2TB18 679 aaPredicted RBP12.44□□□□□ -0.42
MSH3-201ENST00000265081 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 KRT79Q5XKE5 535 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 DPY19L2P1Q6NXN4 242 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 MTMR14Q8NCE2 650 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 ANO3Q9BYT9 981 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 VPS33BQ9H267 617 aa12.44□□□□□ -0.42
MSH3-201ENST00000265081 RBAK-RBAKDNI3L0D1 243 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 EIF6P56537 245 aaKnown RBP12.43□□□□□ -0.42
MSH3-201ENST00000265081 DMTNQ08495 405 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 COASYQ13057 564 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 WHAMMP3Q1A5X7 153 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 SNX29Q8TEQ0 813 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 CEP63Q96MT8 703 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
MSH3-201ENST00000265081 MAN2A1Q16706 1144 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 BAP1Q92560 729 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
MSH3-201ENST00000265081 VAV3Q9UKW4 847 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 MTMR7Q9Y216 660 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 ATP8B3O60423 1300 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 SLC16A2P36021 539 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
MSH3-201ENST00000265081 CEP112Q8N8E3 955 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 CPLX3Q8WVH0 158 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 SYN2Q92777 582 aaPredicted RBP12.43□□□□□ -0.42
MSH3-201ENST00000265081 ZBED3Q96IU2 234 aaPredicted RBP12.43□□□□□ -0.42
MSH3-201ENST00000265081 ANKZF1Q9H8Y5 726 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 AGPAT5Q9NUQ2 364 aa12.43□□□□□ -0.42
MSH3-201ENST00000265081 HERC5Q9UII4 1024 aaKnown RBP12.43□□□□□ -0.42
MSH3-201ENST00000265081 H0YIN7 160 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 TBC1D12O60347 775 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 GHRHRQ02643 423 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 BMT2Q1RMZ1 405 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 KIF4BQ2VIQ3 1234 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 ARSHQ5FYA8 562 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 SUPT20HQ8NEM7 779 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 FKBP1CQ5VVH2 108 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 SLC35F6Q8N357 371 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 GOLGA1Q92805 767 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 PSMD1Q99460 953 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 FGFR1OPO95684 399 aaKnown RBP12.42□□□□□ -0.42
MSH3-201ENST00000265081 APBA3O96018 575 aa12.42□□□□□ -0.42
MSH3-201ENST00000265081 FOSP01100 380 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms