RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 TUBB6Q9BUF5 446 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 ARHGEF10LQ9HCE6 1279 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 PCDHA7Q9UN72 937 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 TPRP12270 2363 aaKnown RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 TBC1D8O95759 1140 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 FBLN1P23142 703 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 CUL4AQ13619 759 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 KRT12Q99456 494 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 NRDE2Q9H7Z3 1164 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 EPN1Q9Y6I3 576 aaPredicted RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 MAP3K19Q56UN5 1328 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 PPP6R2O75170 966 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 TSHZ1Q6ZSZ6 1077 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 FAM192AQ9GZU8 254 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 FAM207AQ9NSI2 230 aaPredicted RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 CARMIL3Q8ND23 1372 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 CEP170Q5SW79 1584 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 THAP12O43422 761 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 GCKRQ14397 625 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 FAM186BQ8IYM0 893 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 MTRQ99707 1265 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 TRIM31Q9BZY9 425 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 A1CFQ9NQ94 594 aaKnown RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 MED23Q9ULK4 1368 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 PASKQ96RG2 1323 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 LMNB2Q03252 620 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 PARP10Q53GL7 1025 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 SSH3Q8TE77 659 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 FOXP1Q9H334 677 aaPredicted RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 GOLGA8QA0A0J9YX86 632 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 GOLGA8OA6NCC3 632 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 GOLGA8NF8WBI6 632 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 TSPAN9O75954 239 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 KCNA2P16389 499 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 HARSP12081 509 aaKnown RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 TRAPPC10P48553 1259 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 ARHGAP4P98171 946 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 STRN3Q13033 797 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 H0YCG3 227 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 BACH1O14867 736 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 OR52Z1P0C646 297 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 ZNF790Q6PG37 636 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 DNAJC9Q8WXX5 260 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 EYA3Q99504 573 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 ARHGEF35A5YM69 484 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 LONP1P36776 959 aaKnown RBP6.18□□□□□ -1.42
VCAN-201ENST00000265077 MAGEA8P43361 318 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 G2E3Q7L622 706 aa6.18□□□□□ -1.42
VCAN-201ENST00000265077 MYH14Q7Z406 1995 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 P4HA2O15460 535 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 GCNT3O95395 438 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 LMNB1P20700 586 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 PNOCQ13519 176 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 SARM1Q6SZW1 724 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 PLA2G4DQ86XP0 818 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 HAUS8Q9BT25 410 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 RIC8AQ9NPQ8 531 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 STAP2Q9UGK3 403 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 KCNK3O14649 394 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 WDR46O15213 610 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 RPN1P04843 607 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 SERPINB4P48594 390 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 PSMC1P62191 440 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 MGARPQ8TDB4 240 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 BHMTQ93088 406 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 TMOD4Q9NZQ9 345 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 ATP7BP35670 1465 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 KRT38O76015 456 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 CCDC15Q0P6D6 951 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 TRMT1LQ7Z2T5 733 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 MYOCDQ8IZQ8 938 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 CORO1CQ9ULV4 474 aaPredicted RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 R3HDM2Q9Y2K5 976 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 NEURL1BA8MQ27 555 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 RTN3O95197 1032 aaPredicted RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 OATP04181 439 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 IL9RQ01113 521 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 BEND3Q5T5X7 828 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 TRMT2AQ8IZ69 625 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 KIRREL3Q8IZU9 778 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 VTI1AQ96AJ9 217 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 SH3GL1Q99961 368 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 PRELID1Q9Y255 219 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 ADCY3O60266 1144 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 P4HA1P13674 534 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 MSH2P43246 934 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 CASC4Q6P4E1 433 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 TRMT44Q8IYL2 757 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 SPATA5Q8NB90 893 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 OSBPL5Q9H0X9 879 aaPredicted RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 CD2APQ9Y5K6 639 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 IQGAP3Q86VI3 1631 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 C21orf2O43822 256 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 NDUFA8P51970 172 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 DHTKD1Q96HY7 919 aaPredicted RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 CCT8L2Q96SF2 557 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms