RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 WDR93Q6P2C0 686 aa14.01□□□□□ -0.17
LIG1-201ENST00000263274 CLEC4GQ6UXB4 293 aa14.01□□□□□ -0.17
LIG1-201ENST00000263274 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
LIG1-201ENST00000263274 PSD3Q9NYI0 1048 aa14.01□□□□□ -0.17
LIG1-201ENST00000263274 LRP6O75581 1613 aa14.01□□□□□ -0.17
LIG1-201ENST00000263274 SYF2O95926 243 aaKnown RBP14.01□□□□□ -0.17
LIG1-201ENST00000263274 POLR2FP61218 127 aaKnown RBP14.01□□□□□ -0.17
LIG1-201ENST00000263274 NUDT12Q9BQG2 462 aa14.01□□□□□ -0.17
LIG1-201ENST00000263274 BMP2KQ9NSY1 1161 aaPredicted RBP14.01□□□□□ -0.17
LIG1-201ENST00000263274 MYH13Q9UKX3 1938 aa14.01□□□□□ -0.17
LIG1-201ENST00000263274 RASSF10A6NK89 507 aa14□□□□□ -0.17
LIG1-201ENST00000263274 UFL1O94874 794 aa14□□□□□ -0.17
LIG1-201ENST00000263274 FECHP22830 423 aa14□□□□□ -0.17
LIG1-201ENST00000263274 NOP2P46087 812 aaKnown RBP14□□□□□ -0.17
LIG1-201ENST00000263274 HLTFQ14527 1009 aaKnown RBP eCLIP14□□□□□ -0.17
LIG1-201ENST00000263274 MICALL1Q8N3F8 863 aa14□□□□□ -0.17
LIG1-201ENST00000263274 SPATA4Q8NEY3 305 aa14□□□□□ -0.17
LIG1-201ENST00000263274 TSGA10Q9BZW7 698 aa14□□□□□ -0.17
LIG1-201ENST00000263274 JRKLQ9Y4A0 524 aa14□□□□□ -0.17
LIG1-201ENST00000263274 RIMBP2O15034 1052 aa14□□□□□ -0.17
LIG1-201ENST00000263274 GSTO1P78417 241 aa14□□□□□ -0.17
LIG1-201ENST00000263274 RETREG2Q8NC44 543 aa14□□□□□ -0.17
LIG1-201ENST00000263274 PROCA1Q8NCQ7 364 aaPredicted RBP14□□□□□ -0.17
LIG1-201ENST00000263274 DDX12PQ92771 950 aa14□□□□□ -0.17
LIG1-201ENST00000263274 OSBPL9Q96SU4 736 aa14□□□□□ -0.17
LIG1-201ENST00000263274 RAB34Q9BZG1 259 aa14□□□□□ -0.17
LIG1-201ENST00000263274 SNX12Q9UMY4 172 aa14□□□□□ -0.17
LIG1-201ENST00000263274 TOGARAM1Q9Y4F4 1720 aa14□□□□□ -0.17
LIG1-201ENST00000263274 SAMM50Q9Y512 469 aa14□□□□□ -0.17
LIG1-201ENST00000263274 FGFR1OPO95684 399 aaKnown RBP14□□□□□ -0.17
LIG1-201ENST00000263274 TCERG1LQ5VWI1 586 aa14□□□□□ -0.17
LIG1-201ENST00000263274 ICE2Q659A1 982 aa14□□□□□ -0.17
LIG1-201ENST00000263274 DNAAF5Q86Y56 855 aa14□□□□□ -0.17
LIG1-201ENST00000263274 KLHL7Q8IXQ5 586 aa14□□□□□ -0.17
LIG1-201ENST00000263274 RPGRIP1Q96KN7 1286 aa14□□□□□ -0.17
LIG1-201ENST00000263274 HSF2BPO75031 334 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 RFC4P35249 363 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 SLC1A4P43007 532 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 GNGT1P63211 74 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 MIIPQ5JXC2 388 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 BCAS4Q8TDM0 211 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 AK8Q96MA6 479 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 HYOU1Q9Y4L1 999 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 SLC37A4O43826 429 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 EHHADHQ08426 723 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 MAN2A1Q16706 1144 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
LIG1-201ENST00000263274 ZNF804AQ7Z570 1209 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 LSM14BQ9BX40 385 aaKnown RBP13.99□□□□□ -0.17
LIG1-201ENST00000263274 RTCBQ9Y3I0 505 aaKnown RBP13.99□□□□□ -0.17
LIG1-201ENST00000263274 MYH10P35580 1976 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 PALM3A6NDB9 673 aaPredicted RBP13.99□□□□□ -0.17
LIG1-201ENST00000263274 LAD1O00515 517 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 MFSD14BQ5SR56 506 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 GALNT17Q6IS24 598 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
LIG1-201ENST00000263274 RPGRQ92834 1020 aaKnown RBP13.99□□□□□ -0.17
LIG1-201ENST00000263274 NOX5Q96PH1 765 aa13.99□□□□□ -0.17
LIG1-201ENST00000263274 ZSCAN5CA6NGD5 496 aaPredicted RBP13.98□□□□□ -0.17
LIG1-201ENST00000263274 MYL1P05976 194 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 ADCY7P51828 1080 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 GUCY2DQ02846 1103 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 IKQ13123 557 aaPredicted RBP13.98□□□□□ -0.17
LIG1-201ENST00000263274 MEA1Q16626 185 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 SH2D3CQ8N5H7 860 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 TBC1D5Q92609 795 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 C7orf25Q9BPX7 421 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 ZMYND12Q9H0C1 365 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 CUEDC2Q9H467 287 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 ADAMTS1Q9UHI8 967 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 FAM184BQ9ULE4 1060 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 TMCO5BA8MYB1 307 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 GRB10Q13322 594 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 MAATS1Q7Z4T9 603 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 EPB41L5Q9HCM4 733 aa13.98□□□□□ -0.17
LIG1-201ENST00000263274 NPHP3-ACAD11A0A0J9YXS1 232 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 LIG3P49916 1009 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 SLC9C1Q4G0N8 1177 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 KCNK18Q7Z418 384 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 MYOCDQ8IZQ8 938 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
LIG1-201ENST00000263274 GOLPH3Q9H4A6 298 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 SH2D4AQ9H788 454 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 MKRN1Q9UHC7 482 aaKnown RBP13.97□□□□□ -0.17
LIG1-201ENST00000263274 NFU1Q9UMS0 254 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 PLAGL2Q9UPG8 496 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 DUOX1Q9NRD9 1551 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 ANO9A1A5B4 782 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 SLURP2P0DP57 97 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 TTC31Q49AM3 519 aaPredicted RBP13.97□□□□□ -0.17
LIG1-201ENST00000263274 DPP8Q6V1X1 898 aaPredicted RBP13.97□□□□□ -0.17
LIG1-201ENST00000263274 CREG2Q8IUH2 290 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 KRT12Q99456 494 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 RBM12Q9NTZ6 932 aaKnown RBP13.97□□□□□ -0.17
LIG1-201ENST00000263274 FLT1P17948 1338 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 E9PMD0 336 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 G3V3G9 751 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 EBAG9O00559 213 aa13.97□□□□□ -0.17
LIG1-201ENST00000263274 TCP1P17987 556 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms