RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 USP17L3A6NCW0 530 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 USP17L4A6NCW7 530 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 NUTM2BA6NNL0 878 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-201ENST00000263071 NUTM2EB1AL46 878 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-201ENST00000263071 CLTAP09496 248 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 ZBED6P86452 979 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 PDE4DQ08499 809 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 USP17L1Q7RTZ2 530 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 LACRTQ9GZZ8 138 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 EPN3Q9H201 632 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 NLRC4Q9NPP4 1024 aa15.59■□□□□ 0.09
SCARF1-201ENST00000263071 LRRD1A4D1F6 860 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 NCK2O43639 380 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 CREB3O43889 395 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 UPP2O95045 317 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 PRDX5P30044 214 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 LSP1P33241 339 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 SARSP49591 514 aaKnown RBP15.58■□□□□ 0.09
SCARF1-201ENST00000263071 PKN1Q16512 942 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 DTHD1Q6ZMT9 781 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 C2CD5Q86YS7 1000 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.09
SCARF1-201ENST00000263071 CCT8L2Q96SF2 557 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 MMTAG2Q9BU76 263 aaKnown RBP15.58■□□□□ 0.09
SCARF1-201ENST00000263071 NUP58Q9BVL2 599 aa15.58■□□□□ 0.09
SCARF1-201ENST00000263071 SEC24CP53992 1094 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 LRRC41Q15345 812 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 CCDC42Q96M95 316 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 PHACTR1Q9C0D0 580 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 MLXIPQ9HAP2 919 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 ESYT3A0FGR9 886 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 DIAPH2O60879 1101 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 HDLBPQ00341 1268 aaKnown RBP15.58■□□□□ 0.08
SCARF1-201ENST00000263071 TFAP4Q01664 338 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 SPA17Q15506 151 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 SH2D3CQ8N5H7 860 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 GSDMAQ96QA5 445 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 SH3GL2Q99962 352 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 NOC4LQ9BVI4 516 aaKnown RBP15.58■□□□□ 0.08
SCARF1-201ENST00000263071 NOP53Q9NZM5 478 aaKnown RBP15.58■□□□□ 0.08
SCARF1-201ENST00000263071 L3MBTL1Q9Y468 752 aa15.58■□□□□ 0.08
SCARF1-201ENST00000263071 AGPSO00116 658 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 NKRFO15226 690 aaKnown RBP eCLIP15.57■□□□□ 0.08
SCARF1-201ENST00000263071 FCER1AP12319 257 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 TECP42680 631 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 GUCY1A3Q02108 690 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 GJA10Q969M2 543 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.57■□□□□ 0.08
SCARF1-201ENST00000263071 LRWD1Q9UFC0 647 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 MED1Q15648 1581 aaPredicted RBP15.57■□□□□ 0.08
SCARF1-201ENST00000263071 HSF2BPO75031 334 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 ATP6V1G2O95670 118 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 TXKP42681 527 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 POLE2P56282 527 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 DNAAF5Q86Y56 855 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 CCDC170Q8IYT3 715 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 TRIML1Q8N9V2 468 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 EHBP1Q8NDI1 1231 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 MTRQ99707 1265 aa15.57■□□□□ 0.08
SCARF1-201ENST00000263071 PPANQ9NQ55 473 aaKnown RBP15.57■□□□□ 0.08
SCARF1-201ENST00000263071 BACH1O14867 736 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 USP14P54578 494 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 SDCCAG8Q86SQ7 713 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 NLRP14Q86W24 1093 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 DZIP1Q86YF9 867 aaKnown RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 VGLL2Q8N8G2 317 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 RRP36Q96EU6 259 aaKnown RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 ZFATQ9P243 1243 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 A0A1B0GVG6 124 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 PSMA7O14818 248 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 CCNT1O60563 726 aaKnown RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 LUC7L3O95232 432 aaKnown RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 ATP4AP20648 1035 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 MAGEA10P43363 369 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 CCDC155Q8N6L0 562 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 HDAC7Q8WUI4 952 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 TEKT4Q8WW24 435 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 OSBPL1AQ9BXW6 950 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 RNF26Q9BY78 433 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 TMEM60Q9H2L4 133 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 RIC1Q4ADV7 1423 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 SCG2P13521 617 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 LZTS2Q9BRK4 669 aa15.56■□□□□ 0.08
SCARF1-201ENST00000263071 DNAAF2Q9NVR5 837 aaKnown RBP15.56■□□□□ 0.08
SCARF1-201ENST00000263071 MROH5Q6ZUA9 1318 aa15.55■□□□□ 0.08
SCARF1-201ENST00000263071 ZNF189O75820 626 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-201ENST00000263071 MOCS3O95396 460 aa15.55■□□□□ 0.08
SCARF1-201ENST00000263071 GUCY2FP51841 1108 aa15.55■□□□□ 0.08
SCARF1-201ENST00000263071 KIF5AQ12840 1032 aa15.55■□□□□ 0.08
SCARF1-201ENST00000263071 IL17AQ16552 155 aa15.55■□□□□ 0.08
SCARF1-201ENST00000263071 SPATA31A3Q5VYP0 1347 aa15.55■□□□□ 0.08
SCARF1-201ENST00000263071 RCCD1A6NED2 376 aa15.55■□□□□ 0.08
SCARF1-201ENST00000263071 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms