RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 FCER1AP12319 257 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 ARHGAP4P98171 946 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 SLFN12Q8IYM2 578 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 MTMR14Q8NCE2 650 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 MBOAT7Q96N66 472 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 NUDT12Q9BQG2 462 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 VEZTQ9HBM0 779 aa14.46□□□□□ -0.1
SPTLC1-201ENST00000262554 PHLPP2Q6ZVD8 1323 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 LGALS16A8MUM7 142 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 MMP14P50281 582 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 STAT2P52630 851 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 TOGARAM2Q6ZUX3 1019 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 DYMQ7RTS9 669 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 SPICE1Q8N0Z3 855 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 DUSP9Q99956 384 aaKnown RBP14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 KCNMB3Q9NPA1 279 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 PRR12Q9ULL5 1215 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 TMX2Q9Y320 296 aa14.45□□□□□ -0.1
SPTLC1-201ENST00000262554 TBC1D12O60347 775 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 PSMD2Q13200 908 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 HYIQ5T013 277 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 ANKRD40Q6AI12 368 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 FAM83AQ86UY5 434 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 KIAA0895Q8NCT3 520 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 CRYGNQ8WXF5 182 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 DDX12PQ92771 950 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 PDCL3Q9H2J4 239 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 SLC39A2Q9NP94 309 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 ZBTB21Q9ULJ3 1066 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 A0A1W2PQC6 194 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 SOWAHDA6NJG2 315 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 PES1O00541 588 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 TBX3O15119 743 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 CCDC175P0C221 793 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 SREBF1P36956 1147 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 ECE1P42892 770 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 FXR1P51114 621 aaKnown RBP eCLIP14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 Q4G0T1 1027 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 TRIM65Q6PJ69 517 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 KCNK18Q7Z418 384 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 TEX2Q8IWB9 1127 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 MB21D1Q8N884 522 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 GJA10Q969M2 543 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 SH2D4AQ9H788 454 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 PIM2Q9P1W9 311 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 DNAI1Q9UI46 699 aa14.44□□□□□ -0.1
SPTLC1-201ENST00000262554 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 IDEP14735 1019 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 FECHP22830 423 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 DNM2P50570 870 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 ECM1Q16610 540 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 CENPPQ6IPU0 288 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 ACER1Q8TDN7 264 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 TUBGCP2Q9BSJ2 902 aa14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-201ENST00000262554 PIK3CDO00329 1044 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 FGFR1OPO95684 399 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 TGFB2P61812 414 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 PRR16Q569H4 304 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 FAM83BQ5T0W9 1011 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 HAUS3Q68CZ6 603 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 TMTC1Q8IUR5 882 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 GUF1Q8N442 669 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 CHURC1Q8WUH1 139 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 HPS3Q969F9 1004 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 TMEM39BQ9GZU3 492 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 L2HGDHQ9H9P8 463 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 STK24Q9Y6E0 443 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 SLU7O95391 586 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 MTIF2P46199 727 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 CXCL9Q07325 125 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 MTF1Q14872 753 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 ERMNQ8TAM6 284 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 ETNPPLQ8TBG4 499 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 ZNF507Q8TCN5 953 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 ANKRD7Q92527 254 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 ERO1AQ96HE7 468 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 FAM20AQ96MK3 541 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 P2RX7Q99572 595 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 DESI2Q9BSY9 194 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 SEMA6BQ9H3T3 888 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 KIAA1024Q9UPX6 916 aa14.42□□□□□ -0.1
SPTLC1-201ENST00000262554 B4DLN1 442 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 OPLAHO14841 1288 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 CIITAP33076 1130 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 CAP2P40123 477 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 LRRC63Q05C16 580 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 NCBP1Q09161 790 aaKnown RBP14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 KIAA1755Q5JYT7 1200 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 CIAPIN1Q6FI81 312 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 CYP26C1Q6V0L0 522 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 RAD9BQ6WBX8 426 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 MIGA2Q7L4E1 593 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 UIMC1Q96RL1 719 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 VCPKMTQ9H867 229 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms