RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
KCTD3-201ENST00000259154 CARSP49589 748 aaKnown RBP16.32■□□□□ 0.2
KCTD3-201ENST00000259154 EVX2Q03828 476 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 LRRC14Q15048 493 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 CCDC38Q502W7 563 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 CNNM4Q6P4Q7 775 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 DNAAF5Q86Y56 855 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
KCTD3-201ENST00000259154 SPDL1Q96EA4 605 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 ADAM33Q9BZ11 813 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 UTRNP46939 3433 aa16.32■□□□□ 0.2
KCTD3-201ENST00000259154 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 IFNAR1P17181 557 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 MAGOHP61326 146 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 NR1I3Q14994 352 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 GNPTABQ3T906 1256 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 CCDC93Q567U6 631 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 DENND2CQ68D51 928 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 MAGOHBQ96A72 148 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 CHMP2AO43633 222 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 KLHL29Q96CT2 875 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 INTS9Q9NV88 658 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 MTRF1LQ9UGC7 380 aaKnown RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 ATP6V0A2Q9Y487 856 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 MAP3K15Q6ZN16 1313 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 PDHA1P08559 390 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 AGXT2Q9BYV1 514 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
KCTD3-201ENST00000259154 CTTNBP2NLQ9P2B4 639 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
KCTD3-201ENST00000259154 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
KCTD3-201ENST00000259154 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 AP1ARQ63HQ0 302 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 CCDC84Q86UT8 332 aaPredicted RBP16.3■□□□□ 0.2
KCTD3-201ENST00000259154 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 TUBE1Q9UJT0 475 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 PALMO75781 387 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 SETDB1Q15047 1291 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 RASAL2Q9UJF2 1139 aa16.3■□□□□ 0.2
KCTD3-201ENST00000259154 CCNI2Q6ZMN8 369 aaPredicted RBP16.29■□□□□ 0.2
KCTD3-201ENST00000259154 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
KCTD3-201ENST00000259154 NLRP14Q86W24 1093 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 CCT8L2Q96SF2 557 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 OSBPL9Q96SU4 736 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 NKIRAS1Q9NYS0 192 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 INTUQ9ULD6 942 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
KCTD3-201ENST00000259154 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 CCDC197Q8NCU1 140 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 A0A1B0GTH6 734 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 MEFVO15553 781 aaPredicted RBP16.29■□□□□ 0.2
KCTD3-201ENST00000259154 SMIM24O75264 130 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 ADD2P35612 726 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 TMEM132AQ24JP5 1023 aa16.29■□□□□ 0.2
KCTD3-201ENST00000259154 ZSCAN10Q96SZ4 725 aaPredicted RBP16.29■□□□□ 0.2
KCTD3-201ENST00000259154 EIF3HO15372 352 aaKnown RBP eCLIP16.28■□□□□ 0.2
KCTD3-201ENST00000259154 SCG2P13521 617 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 POLE2P56282 527 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 PHLDB2Q86SQ0 1253 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 RNPC3Q96LT9 517 aaKnown RBP16.28■□□□□ 0.2
KCTD3-201ENST00000259154 ZIM3Q96PE6 472 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 EP400Q96L91 3159 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 PDE8BO95263 885 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 ZBED6P86452 979 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
KCTD3-201ENST00000259154 ZNF449Q6P9G9 518 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 STAG1Q8WVM7 1258 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 USH1CQ9Y6N9 552 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 FCER1AP12319 257 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 STX2P32856 288 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 SIK1P57059 783 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 TRIP13Q15645 432 aaPredicted RBP16.28■□□□□ 0.2
KCTD3-201ENST00000259154 FAM47EQ6ZV65 393 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 RASGRP2Q7LDG7 609 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 RBM12Q9NTZ6 932 aaKnown RBP16.28■□□□□ 0.2
KCTD3-201ENST00000259154 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
KCTD3-201ENST00000259154 NWD2Q9ULI1 1742 aa16.28■□□□□ 0.2
KCTD3-201ENST00000259154 LRRC53A6NM62 1247 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 HIP1RO75146 1068 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 HOOK3Q86VS8 718 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 P2RX5Q93086 422 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 EPB41L4AQ9HCS5 686 aaPredicted RBP16.27■□□□□ 0.2
KCTD3-201ENST00000259154 INTS13Q9NVM9 706 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 SWAP70Q9UH65 585 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 KDM4FA0A1W2PPD8 638 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 CETN3O15182 167 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 GNAT2P19087 354 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 PLCG1P19174 1290 aa16.27■□□□□ 0.2
KCTD3-201ENST00000259154 MDM1Q8TC05 714 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms