RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 DOCK3Q8IZD9 2030 aa19.82■□□□□ 0.76
SRSF1-201ENST00000258962 ZNF202O95125 648 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 TAL1P17542 331 aaPredicted RBP19.81■□□□□ 0.76
SRSF1-201ENST00000258962 ERCC3P19447 782 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 FERMT2Q96AC1 680 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 RLFQ13129 1914 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 SLC15A5A6NIM6 579 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 CTAGE5O15320 804 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 STRNO43815 780 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 CYP2B6P20813 491 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 COPB2P35606 906 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 SYKP43405 635 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 IL17AQ16552 155 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 PXYLP1Q8TE99 480 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 TBCKQ8TEA7 893 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 TEX13BQ9BXU2 312 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 RANBP17Q9H2T7 1088 aaKnown RBP19.81■□□□□ 0.76
SRSF1-201ENST00000258962 PSTPIP2Q9H939 334 aa19.81■□□□□ 0.76
SRSF1-201ENST00000258962 EDIL3O43854 480 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 RGS2P41220 211 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 MRPL12P52815 198 aaKnown RBP19.8■□□□□ 0.76
SRSF1-201ENST00000258962 USP49Q70CQ1 688 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 RIOX2Q8IUF8 465 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 CPXCR1Q8N123 301 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 TMEM60Q9H2L4 133 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 SLC38A10Q9HBR0 1119 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 KCNH3Q9ULD8 1083 aa19.8■□□□□ 0.76
SRSF1-201ENST00000258962 ELNP15502 786 aa19.79■□□□□ 0.76
SRSF1-201ENST00000258962 UBXN2AP68543 259 aa19.79■□□□□ 0.76
SRSF1-201ENST00000258962 USH1GQ495M9 461 aa19.79■□□□□ 0.76
SRSF1-201ENST00000258962 MORN1Q5T089 497 aa19.79■□□□□ 0.76
SRSF1-201ENST00000258962 REPS2Q8NFH8 660 aa19.79■□□□□ 0.76
SRSF1-201ENST00000258962 ZNF333Q96JL9 665 aa19.79■□□□□ 0.76
SRSF1-201ENST00000258962 TIGD1Q96MW7 591 aa19.79■□□□□ 0.76
SRSF1-201ENST00000258962 ZNF214Q9UL59 606 aaPredicted RBP19.79■□□□□ 0.76
SRSF1-201ENST00000258962 OPLAHO14841 1288 aa19.78■□□□□ 0.76
SRSF1-201ENST00000258962 MYCP01106 439 aaPredicted RBP19.78■□□□□ 0.76
SRSF1-201ENST00000258962 XRCC5P13010 732 aaKnown RBP19.78■□□□□ 0.76
SRSF1-201ENST00000258962 TYRO3Q06418 890 aa19.78■□□□□ 0.76
SRSF1-201ENST00000258962 MAP2K5Q13163 448 aa19.78■□□□□ 0.76
SRSF1-201ENST00000258962 LETM2Q2VYF4 491 aa19.78■□□□□ 0.76
SRSF1-201ENST00000258962 ARL6IP4Q66PJ3 421 aaKnown RBP19.78■□□□□ 0.76
SRSF1-201ENST00000258962 SNRNP48Q6IEG0 339 aaKnown RBP19.78■□□□□ 0.76
SRSF1-201ENST00000258962 TMEM106CQ9BVX2 250 aa19.78■□□□□ 0.76
SRSF1-201ENST00000258962 GLT8D2Q9H1C3 349 aa19.78■□□□□ 0.76
SRSF1-201ENST00000258962 RAVER2Q9HCJ3 691 aaKnown RBP19.78■□□□□ 0.76
SRSF1-201ENST00000258962 FAM13BQ9NYF5 915 aa19.78■□□□□ 0.76
SRSF1-201ENST00000258962 VWA3AA6NCI4 1184 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 MEIS2O14770 477 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 ATP2A1O14983 1001 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 CCDC192P0DO97 292 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 FCER1AP12319 257 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 OAZ1P54368 228 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 USP17L6PQ6QN14 398 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 DPP9Q86TI2 863 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 TRMT44Q8IYL2 757 aaKnown RBP19.77■□□□□ 0.76
SRSF1-201ENST00000258962 PANK2Q9BZ23 570 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 SLC5A4Q9NY91 659 aa19.77■□□□□ 0.76
SRSF1-201ENST00000258962 CCNT1O60563 726 aaKnown RBP19.76■□□□□ 0.75
SRSF1-201ENST00000258962 GRB14Q14449 540 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 CCDC174Q6PII3 467 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 ABRAQ8N0Z2 381 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 USP6NLQ92738 828 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 SYMPKQ92797 1274 aaKnown RBP19.76■□□□□ 0.75
SRSF1-201ENST00000258962 EPSTI1Q96J88 318 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 APBA2Q99767 749 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 SDF4Q9BRK5 362 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 RBBP6Q7Z6E9 1792 aaKnown RBP19.76■□□□□ 0.75
SRSF1-201ENST00000258962 ADORA2AP29274 412 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 SOX10P56693 466 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 ORC2Q13416 577 aaPredicted RBP19.76■□□□□ 0.75
SRSF1-201ENST00000258962 KCTD2Q14681 263 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 LONRF3Q496Y0 759 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 RNF214Q8ND24 703 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 ANP32BQ92688 251 aaKnown RBP19.76■□□□□ 0.75
SRSF1-201ENST00000258962 ERCC4Q92889 916 aaPredicted RBP19.76■□□□□ 0.75
SRSF1-201ENST00000258962 MMP19Q99542 508 aa19.76■□□□□ 0.75
SRSF1-201ENST00000258962 COL11A1P12107 1806 aaPredicted RBP19.75■□□□□ 0.75
SRSF1-201ENST00000258962 A0A0G2JMZ2 1700 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 A0A087X0B3 334 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.75■□□□□ 0.75
SRSF1-201ENST00000258962 LAD1O00515 517 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 NEMFO60524 1076 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 HMGCRP04035 888 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 INHAP05111 366 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 PRPHP41219 470 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 KRBA2Q6ZNG9 492 aa19.75■□□□□ 0.75
SRSF1-201ENST00000258962 POLR2DO15514 142 aaKnown RBP19.74■□□□□ 0.75
SRSF1-201ENST00000258962 TDP2O95551 362 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 OR52Z1P0C646 297 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 TRAF1Q13077 416 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 AP3B2Q13367 1082 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 SASS6Q6UVJ0 657 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 ANO3Q9BYT9 981 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 FBXO40Q9UH90 709 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 RIPK3Q9Y572 518 aa19.74■□□□□ 0.75
SRSF1-201ENST00000258962 ZNF536O15090 1300 aa19.73■□□□□ 0.75
SRSF1-201ENST00000258962 HOXC6P09630 235 aa19.73■□□□□ 0.75
SRSF1-201ENST00000258962 LONP1P36776 959 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms