RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 POLR2MP0CAP2 368 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 EEF1DP29692 281 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 MAGEA9P43362 315 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 YWHAGP61981 247 aaKnown RBP eCLIP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 PTGDRQ13258 359 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ADAM9Q13443 819 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ZNF658Q5TYW1 1059 aaPredicted RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 SUCLG2Q96I99 432 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 DBNDD2Q9BQY9 259 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ZMYND12Q9H0C1 365 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 NOD1Q9Y239 953 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 MAD1L1Q9Y6D9 718 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 SCINQ9Y6U3 715 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TYW5A2RUC4 315 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 EIF6P56537 245 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 POLR2FP61218 127 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ALCAMQ13740 583 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 NME8Q8N427 588 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 FAM89AQ96GI7 184 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TRIM33Q9UPN9 1127 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ZNF638Q14966 1978 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ANKARQ7Z5J8 1434 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 A0A0D9SFI3 127 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 KCNA4P22459 653 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 LRMPQ12912 555 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ASPRV1Q53RT3 343 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 FAM160B1Q5W0V3 765 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 KAZNQ674X7 775 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 KCTD16Q68DU8 428 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TTC19Q6DKK2 380 aaPredicted RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 RAPH1Q70E73 1250 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ZNF526Q8TF50 670 aaPredicted RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 JPH2Q9BR39 696 aaPredicted RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TNNQ9UQP3 1299 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 NEO1Q92859 1461 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 DISP1Q96F81 1524 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 PLS3P13797 630 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 PTPREP23469 700 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 MAML1Q92585 1016 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.2□□□□□ -1.583e-6■■■■■ 50.4
RC3H1-201ENST00000258349 ZNF594Q96JF6 807 aaPredicted RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 C19orf44Q9H6X5 657 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 IVNS1ABPQ9Y6Y0 642 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 EXOC1LA0A1B0GW35 172 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ESYT2A0FGR8 921 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 AFPP02771 609 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 H2AFZP0C0S5 128 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 POLGP54098 1239 aaPredicted RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 C2orf54Q08AI8 447 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TMED1Q13445 227 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TMED2Q15363 201 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 C16orf87Q6PH81 154 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 H2AFVQ71UI9 128 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 G2E3Q7L622 706 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 LRRC59Q96AG4 307 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TTC25Q96NG3 672 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TRAIPQ9BWF2 469 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TMEM60Q9H2L4 133 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 MAP3K19Q56UN5 1328 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ZNF233A6NK53 670 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ERVV-2B6SEH9 535 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 IPO5O00410 1097 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 KIF1CO43896 1103 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 MX2P20592 715 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 CASP14P31944 242 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 CAV1Q03135 178 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 PSMD2Q13200 908 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 LRRC43Q8N309 656 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 KCTD6Q8NC69 237 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ARHGEF28Q8N1W1 1705 aaKnown RBP5.2□□□□□ -1.58
RC3H1-201ENST00000258349 MAN1A2O60476 641 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TIMM10P62072 90 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 DR1Q01658 176 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TAF11Q15544 211 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 VSTM4Q8IW00 320 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 FANCBQ8NB91 859 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 ANKRD36BP1Q96IX9 119 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 TTC1Q99614 292 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 EPB41L5Q9HCM4 733 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 UGGT1Q9NYU2 1555 aa5.2□□□□□ -1.58
RC3H1-201ENST00000258349 MAPK4P31152 587 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PDE6BP35913 854 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 DHX9Q08211 1270 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 NNTQ13423 1086 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TNFAIP1Q13829 316 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 CDC37Q16543 378 aaPredicted RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 MAN2A1Q16706 1144 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TSC22D3Q99576 134 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 DPH5Q9H2P9 285 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ST7Q9NRC1 585 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 PTK2Q05397 1052 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 LRRC63Q05C16 580 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 ITKQ08881 620 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 RBL2Q08999 1139 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 SLC35F6Q8N357 371 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 CACTINQ8WUQ7 758 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 DEPDC1BQ8WUY9 529 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 TCP11Q8WWU5 503 aa5.19□□□□□ -1.58
RC3H1-201ENST00000258349 MAGOHBQ96A72 148 aaKnown RBP5.19□□□□□ -1.58
RC3H1-201ENST00000258349 LSG1Q9H089 658 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms