RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RGPD4Q7Z3J3 1758 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 SPDYE2BA6NHP3 402 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 ABL1P00519 1130 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 SPDYE6P0CI01 402 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 ECE1P42892 770 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 CYP26C1Q6V0L0 522 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 GTPBP4Q9BZE4 634 aaKnown RBP24.19■■□□□ 1.46
CLN6-201ENST00000249806 KCNMB3Q9NPA1 279 aa24.19■■□□□ 1.46
CLN6-201ENST00000249806 PSMD14O00487 310 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 MTIF2P46199 727 aaKnown RBP24.18■■□□□ 1.46
CLN6-201ENST00000249806 KLK7P49862 253 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 RSBN1LQ6PCB5 846 aaPredicted RBP24.18■■□□□ 1.46
CLN6-201ENST00000249806 ZNF277Q9NRM2 450 aaPredicted RBP24.18■■□□□ 1.46
CLN6-201ENST00000249806 E9PMD0 336 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 STAT3P40763 770 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 ARHGAP4P98171 946 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 TBC1D8BQ0IIM8 1120 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 LRRC41Q15345 812 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 MIIPQ5JXC2 388 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 TTLL6Q8N841 843 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 NAP1L4Q99733 375 aaKnown RBP24.18■■□□□ 1.46
CLN6-201ENST00000249806 CARD6Q9BX69 1037 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 KIAA1024Q9UPX6 916 aa24.18■■□□□ 1.46
CLN6-201ENST00000249806 LUC7L2Q9Y383 392 aaKnown RBP24.18■■□□□ 1.46
CLN6-201ENST00000249806 CYP3A7-CYP3A51PA0A087WV96 503 aa24.17■■□□□ 1.46
CLN6-201ENST00000249806 SSBP05455 408 aaKnown RBP eCLIP24.17■■□□□ 1.46
CLN6-201ENST00000249806 CYP3A7P24462 503 aa24.17■■□□□ 1.46
CLN6-201ENST00000249806 OR8K1Q8NGG5 319 aa24.17■■□□□ 1.46
CLN6-201ENST00000249806 CRYGNQ8WXF5 182 aa24.17■■□□□ 1.46
CLN6-201ENST00000249806 DNAJC19Q96DA6 116 aa24.17■■□□□ 1.46
CLN6-201ENST00000249806 NOC4LQ9BVI4 516 aaKnown RBP24.17■■□□□ 1.46
CLN6-201ENST00000249806 RASSF10A6NK89 507 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 MAP3K9P80192 1104 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 EHHADHQ08426 723 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 PRR16Q569H4 304 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 KIAA1755Q5JYT7 1200 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 FAM114A1Q8IWE2 563 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 TMOD2Q9NZR1 351 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 RGS17Q9UGC6 210 aaPredicted RBP24.16■■□□□ 1.46
CLN6-201ENST00000249806 CAPN11Q9UMQ6 739 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 AP3B2Q13367 1082 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 LARGE2Q8N3Y3 721 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 GUF1Q8N442 669 aaKnown RBP24.16■■□□□ 1.46
CLN6-201ENST00000249806 ACER1Q8TDN7 264 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 SLF1Q9BQI6 1058 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 AGPAT5Q9NUQ2 364 aa24.16■■□□□ 1.46
CLN6-201ENST00000249806 ZNF70Q9UC06 446 aaPredicted RBP24.16■■□□□ 1.46
CLN6-201ENST00000249806 POTEB3A0JP26 581 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 POTECB2RU33 542 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 OPLAHO14841 1288 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 HOXA13P31271 388 aaPredicted RBP24.15■■□□□ 1.46
CLN6-201ENST00000249806 HYIQ5T013 277 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 FBXO38Q6PIJ6 1188 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 POTEBQ6S5H4 581 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 POTEAQ6S8J7 498 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 MBOAT7Q96N66 472 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 LRRC27Q9C0I9 530 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 SPDYE4A6NLX3 237 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 DLGAP5Q15398 846 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 CDAN1Q8IWY9 1227 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 GMLQ99445 158 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 DNAJC7Q99615 494 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 HERC5Q9UII4 1024 aaKnown RBP24.15■■□□□ 1.46
CLN6-201ENST00000249806 PRR12Q9ULL5 1215 aa24.15■■□□□ 1.46
CLN6-201ENST00000249806 VIL1P09327 827 aaKnown RBP24.14■■□□□ 1.46
CLN6-201ENST00000249806 WDR59Q6PJI9 974 aa24.14■■□□□ 1.46
CLN6-201ENST00000249806 BTNL9Q6UXG8 535 aa24.14■■□□□ 1.46
CLN6-201ENST00000249806 MNS1Q8NEH6 495 aa24.14■■□□□ 1.46
CLN6-201ENST00000249806 NT5C3AQ9H0P0 336 aa24.14■■□□□ 1.46
CLN6-201ENST00000249806 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.14■■□□□ 1.46
CLN6-201ENST00000249806 UTRNP46939 3433 aa24.14■■□□□ 1.46
CLN6-201ENST00000249806 COL4A5P29400 1685 aa24.14■■□□□ 1.45
CLN6-201ENST00000249806 SPDYE3A6NKU9 549 aa24.14■■□□□ 1.45
CLN6-201ENST00000249806 FAM86B1E9PN63 330 aa24.14■■□□□ 1.45
CLN6-201ENST00000249806 FAM86B2P0C5J1 330 aa24.14■■□□□ 1.45
CLN6-201ENST00000249806 TRIM21P19474 475 aaKnown RBP24.14■■□□□ 1.45
CLN6-201ENST00000249806 ETNPPLQ8TBG4 499 aa24.14■■□□□ 1.45
CLN6-201ENST00000249806 TTYH3Q9C0H2 523 aa24.14■■□□□ 1.45
CLN6-201ENST00000249806 MRFAP1Q9Y605 127 aa24.14■■□□□ 1.45
CLN6-201ENST00000249806 PSME4Q14997 1843 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 NPHP3-ACAD11A0A0J9YXS1 232 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 KIF5CO60282 957 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 MED24O75448 989 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 ERCC3P19447 782 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 KCNA3P22001 575 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 CACNB1Q02641 598 aaPredicted RBP24.13■■□□□ 1.45
CLN6-201ENST00000249806 COASYQ13057 564 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 ARHGAP29Q52LW3 1261 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 RTKN2Q8IZC4 609 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 OGFOD1Q8N543 542 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 ZNF397Q8NF99 534 aaPredicted RBP24.13■■□□□ 1.45
CLN6-201ENST00000249806 PANK4Q9NVE7 773 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 EPN1Q9Y6I3 576 aaPredicted RBP24.13■■□□□ 1.45
CLN6-201ENST00000249806 KDM3AQ9Y4C1 1321 aa24.13■■□□□ 1.45
CLN6-201ENST00000249806 COL2A1P02458 1487 aaPredicted RBP24.13■■□□□ 1.45
CLN6-201ENST00000249806 PLA2G4BP0C869 781 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 RAD51AP2Q09MP3 1159 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 PSMD2Q13200 908 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 ZNF569Q5MCW4 686 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 SLFN12Q8IYM2 578 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms