RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 GNA11P29992 359 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 CENPPQ6IPU0 288 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 CAGE1Q8TC20 777 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 IQCDQ96DY2 449 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 FAM204AQ9H8W3 233 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 TMEM51Q9NW97 253 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 PLAGL2Q9UPG8 496 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 SIK3Q9Y2K2 1263 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.36
CTSD-201ENST00000236671 RNF40O75150 1001 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.35
CTSD-201ENST00000236671 ALDH1B1P30837 517 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 TNNT3P45378 269 aaPredicted RBP17.27■□□□□ 0.35
CTSD-201ENST00000236671 RASSF7Q02833 373 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.35
CTSD-201ENST00000236671 USP17L2Q6R6M4 530 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 KRT26Q7Z3Y9 468 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 TBCKQ8TEA7 893 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 COG1Q8WTW3 980 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 CNKSR1Q969H4 720 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 RRP36Q96EU6 259 aaKnown RBP17.27■□□□□ 0.35
CTSD-201ENST00000236671 CCDC42Q96M95 316 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 RTFDC1Q9BY42 306 aaPredicted RBP17.27■□□□□ 0.35
CTSD-201ENST00000236671 SLC39A2Q9NP94 309 aa17.27■□□□□ 0.35
CTSD-201ENST00000236671 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 EPHB6O15197 1021 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 MYBL2P10244 700 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 GRB10Q13322 594 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 GPR162Q16538 588 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 VWA3BQ502W6 1294 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 C16orf86Q6ZW13 317 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 CALML4Q96GE6 196 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 EYA3Q99504 573 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 BLOC1S4Q9NUP1 217 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 ARHGAP20Q9P2F6 1191 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 FEZ2Q9UHY8 353 aaPredicted RBP17.26■□□□□ 0.35
CTSD-201ENST00000236671 CDK5RAP2Q96SN8 1893 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 ZMYND10O75800 440 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 IVLP07476 585 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 CDK8P49336 464 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 PRELPP51888 382 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 GPSM2P81274 684 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 C2orf54Q08AI8 447 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 SPA17Q15506 151 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 REXO1Q8N1G1 1221 aaKnown RBP17.26■□□□□ 0.35
CTSD-201ENST00000236671 NEDD1Q8NHV4 660 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 SMCR8Q8TEV9 937 aaPredicted RBP17.26■□□□□ 0.35
CTSD-201ENST00000236671 PIGSQ96S52 555 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 ZNF287Q9HBT7 754 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 JADE2Q9NQC1 790 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 SNX12Q9UMY4 172 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 CAPN6Q9Y6Q1 641 aa17.26■□□□□ 0.35
CTSD-201ENST00000236671 MYMKA6NI61 221 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 LCA5LO95447 670 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 CCDC96Q2M329 555 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 CCNI2Q6ZMN8 369 aaPredicted RBP17.25■□□□□ 0.35
CTSD-201ENST00000236671 SV2BQ7L1I2 683 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 ZNF572Q7Z3I7 529 aaPredicted RBP17.25■□□□□ 0.35
CTSD-201ENST00000236671 CREG2Q8IUH2 290 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 GSPT2Q8IYD1 628 aaKnown RBP17.25■□□□□ 0.35
CTSD-201ENST00000236671 TRIM58Q8NG06 486 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 PNMA5Q96PV4 448 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 TSPYL1Q9H0U9 437 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 NDST4Q9H3R1 872 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 BIN2Q9UBW5 565 aaPredicted RBP17.25■□□□□ 0.35
CTSD-201ENST00000236671 SEC63Q9UGP8 760 aaKnown RBP17.25■□□□□ 0.35
CTSD-201ENST00000236671 LCMT1Q9UIC8 334 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 JRKLQ9Y4A0 524 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
CTSD-201ENST00000236671 ESYT2A0FGR8 921 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 SMARCA1P28370 1054 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 SLC20A2Q08357 652 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 IQCEQ6IPM2 695 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 UNC13DQ70J99 1090 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 IFIH1Q9BYX4 1025 aaKnown RBP17.24■□□□□ 0.35
CTSD-201ENST00000236671 STK17AQ9UEE5 414 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 ATP6V0A2Q9Y487 856 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 PCDHA13Q9Y5I0 950 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 ABCB11O95342 1321 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 LDHCP07864 332 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 TXKP42681 527 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 BTDP43251 543 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTSD-201ENST00000236671 KIF11P52732 1056 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 MAN2A1Q16706 1144 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 SRLQ86TD4 932 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 GDAP1L1Q96MZ0 367 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 SELENOOQ9BVL4 669 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 MLXIPQ9HAP2 919 aa17.24■□□□□ 0.35
CTSD-201ENST00000236671 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
CTSD-201ENST00000236671 PVALEFA0A1B0GWK0 134 aa17.23■□□□□ 0.35
CTSD-201ENST00000236671 CALCRLQ16602 461 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms