RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 SAMD3Q8N6K7 520 aa12.04□□□□□ -0.48
CDCA3-201ENST00000229265 PIGSQ96S52 555 aa12.04□□□□□ -0.48
CDCA3-201ENST00000229265 PARK7Q99497 189 aaKnown RBP12.04□□□□□ -0.48
CDCA3-201ENST00000229265 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
CDCA3-201ENST00000229265 JMJD4Q9H9V9 463 aa12.04□□□□□ -0.48
CDCA3-201ENST00000229265 SERTAD1Q9UHV2 236 aa12.04□□□□□ -0.48
CDCA3-201ENST00000229265 PNMA2Q9UL42 364 aa12.04□□□□□ -0.48
CDCA3-201ENST00000229265 SZT2Q5T011 3432 aa12.04□□□□□ -0.48
CDCA3-201ENST00000229265 hCG_1642624A0A1W2PR95 340 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
CDCA3-201ENST00000229265 EEF2P13639 858 aaKnown RBP12.03□□□□□ -0.48
CDCA3-201ENST00000229265 ATP2B1P20020 1258 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 SLC1A4P43007 532 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 ADCY7P51828 1080 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 CCL14Q16627 93 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 SLC9C1Q4G0N8 1177 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 SLFN13Q68D06 897 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 C11orf57Q6ZUT1 292 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-201ENST00000229265 FASTKD5Q7L8L6 764 aaKnown RBP12.03□□□□□ -0.48
CDCA3-201ENST00000229265 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-201ENST00000229265 SYMPKQ92797 1274 aaKnown RBP12.03□□□□□ -0.48
CDCA3-201ENST00000229265 CUL5Q93034 780 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 PAGE5Q96GU1 130 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 SLC45A1Q9Y2W3 748 aa12.03□□□□□ -0.48
CDCA3-201ENST00000229265 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.48
CDCA3-201ENST00000229265 VWA3AA6NCI4 1184 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 F5H6K3 240 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 AP5Z1O43299 807 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
CDCA3-201ENST00000229265 GOLGA8HP0CJ92 632 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 VCAM1P19320 739 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 MCM7P33993 719 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 UBA7P41226 1012 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDCA3-201ENST00000229265 HERVK_113P62684 666 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 KLRC3Q07444 240 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 AP3B2Q13367 1082 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 KCNB1Q14721 858 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 NCAPHQ15003 741 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 E2F4Q16254 413 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 DPCR1Q3MIW9 517 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 DIS3LQ8TF46 1054 aaKnown RBP12.02□□□□□ -0.49
CDCA3-201ENST00000229265 CHURC1Q8WUH1 139 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
CDCA3-201ENST00000229265 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 MAF1Q9H063 256 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 VAT1LQ9HCJ6 419 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 RRAGDQ9NQL2 400 aaPredicted RBP12.02□□□□□ -0.49
CDCA3-201ENST00000229265 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 MORF4L1Q9UBU8 362 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 SMCHD1A6NHR9 2005 aa12.02□□□□□ -0.49
CDCA3-201ENST00000229265 CYP3A7-CYP3A51PA0A087WV96 503 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 LRRC10BA6NIK2 292 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 USP17L10C9JJH3 530 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 TBX3O15119 743 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 NRDCO43847 1150 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 OFD1O75665 1012 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 TUBB4AP04350 444 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 ASNSP08243 561 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 OR52Z1P0C646 297 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 CCL5P13501 91 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-201ENST00000229265 CYP3A7P24462 503 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 ICA1Q05084 483 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 DPYDQ12882 1025 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 PNOCQ13519 176 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 TMEM266Q2M3C6 531 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 DRC7Q8IY82 874 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 PIBF1Q8WXW3 757 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 TRIB2Q92519 343 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 USP6NLQ92738 828 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 CCDC47Q96A33 483 aaKnown RBP12.01□□□□□ -0.49
CDCA3-201ENST00000229265 EPSTI1Q96J88 318 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 MTMR9Q96QG7 549 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 CTAGE1Q96RT6 745 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 AMNQ9BXJ7 453 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 KCND1Q9NSA2 647 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
CDCA3-201ENST00000229265 MAN1B1Q9UKM7 699 aa12.01□□□□□ -0.49
CDCA3-201ENST00000229265 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
CDCA3-201ENST00000229265 INHAP05111 366 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 FDX1P10109 184 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 BMP3P12645 472 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 TAL1P17542 331 aaPredicted RBP12□□□□□ -0.49
CDCA3-201ENST00000229265 GRK4P32298 578 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 KCNJ6P48051 423 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 GRIN1Q05586 938 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 FAM110CQ1W6H9 321 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 INF2Q27J81 1249 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 COBLL1Q53SF7 1204 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 RRAGBQ5VZM2 374 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
CDCA3-201ENST00000229265 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
CDCA3-201ENST00000229265 FAM160B2Q86V87 743 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms