RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ZSCAN26Q16670 478 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 FERMT2Q96AC1 680 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 FEM1BQ9UK73 627 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 KIF2AO00139 706 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 POLR2MP0CAP2 368 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 BACE1P56817 501 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 TRAF1Q13077 416 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 CCDC150Q8NCX0 1101 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 LZTFL1Q9NQ48 299 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 DDX25Q9UHL0 483 aaKnown RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 IRX3P78415 501 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 WDR24Q96S15 920 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 ANO3Q9BYT9 981 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 ZHX3Q9H4I2 956 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 RIC8AQ9NPQ8 531 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 FBXO2Q9UK22 296 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 MRPL11Q9Y3B7 192 aaKnown RBP13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 hCG_1984214I3L0E3 225 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 TRAF5O00463 557 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 FANCGO15287 622 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 CHMP2AO43633 222 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 OR52Z1P0C646 297 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 CASP1P29466 404 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 CASQ1P31415 396 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 VGLL4Q14135 290 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 FMR1NBQ8N0W7 255 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 ZNF713Q8N859 430 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 ATG4CQ96DT6 458 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 CLMNQ96JQ2 1002 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 VPS18Q9P253 973 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 RRAGBQ5VZM2 374 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 RAB34Q9BZG1 259 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
TNFAIP1-201ENST00000226225 FOXN1O15353 648 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 GPS2Q13227 327 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 LRWD1Q9UFC0 647 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 WDR46O15213 610 aaKnown RBP13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 LPAR1Q92633 364 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 CDCA5Q96FF9 252 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 SUGCTQ9HAC7 445 aa13.09□□□□□ -0.31
TNFAIP1-201ENST00000226225 PPP2R3AQ06190 1150 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 RESP18Q5W5W9 173 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 CALML4Q96GE6 196 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 L2HGDHQ9H9P8 463 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 ARFGAP3Q9NP61 516 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 FANCLQ9NW38 375 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 PCDHA12Q9UN75 941 aa13.08□□□□□ -0.31
TNFAIP1-201ENST00000226225 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 NOVP48745 357 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 ATP2C1P98194 919 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 SP4Q02446 784 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 PARD6BQ9BYG5 372 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 SAMM50Q9Y512 469 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 POTEMA6NI47 508 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 RHOXF2BP0C7M4 288 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 IDEP14735 1019 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 ARHGAP4P98171 946 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 USP50Q70EL3 339 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 TNFRSF25Q93038 417 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
TNFAIP1-201ENST00000226225 PEX10O60683 326 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 KRT79Q5XKE5 535 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 RABEP2Q9H5N1 569 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 SLC37A4O43826 429 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 SORBS3O60504 671 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 KRT18P05783 430 aaKnown RBP13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 EIF2AK2P19525 551 aaKnown RBP13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 TOGARAM2Q6ZUX3 1019 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 CABP7Q86V35 215 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 SNX29Q8TEQ0 813 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 HINFPQ9BQA5 517 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
TNFAIP1-201ENST00000226225 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms