RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ARHGAP25P42331 645 aa27.83■■■□□ 2.05
RUNDC3A-201ENST00000225441 NONOQ15233 471 aaKnown RBP eCLIP27.83■■■□□ 2.05
RUNDC3A-201ENST00000225441 HEATR3Q7Z4Q2 680 aa27.83■■■□□ 2.05
RUNDC3A-201ENST00000225441 TMEM60Q9H2L4 133 aa27.83■■■□□ 2.05
RUNDC3A-201ENST00000225441 RASA3Q14644 834 aa27.82■■■□□ 2.04
RUNDC3A-201ENST00000225441 INF2Q27J81 1249 aa27.82■■■□□ 2.04
RUNDC3A-201ENST00000225441 CERKLQ49MI3 558 aaPredicted RBP27.82■■■□□ 2.04
RUNDC3A-201ENST00000225441 TTI2Q6NXR4 508 aa27.82■■■□□ 2.04
RUNDC3A-201ENST00000225441 IRX2Q9BZI1 471 aaPredicted RBP27.82■■■□□ 2.04
RUNDC3A-201ENST00000225441 GBP3Q9H0R5 595 aa27.82■■■□□ 2.04
RUNDC3A-201ENST00000225441 GREB1LQ9C091 1923 aaPredicted RBP27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 CDAN1Q8IWY9 1227 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 SLC35F6Q8N357 371 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 EHBP1Q8NDI1 1231 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 KLRF2D3W0D1 207 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 NDUFA10O95299 355 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 CCNE1P24864 410 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 KRT83P78385 493 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 SLC35G1Q2M3R5 365 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 CABP7Q86V35 215 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 TRIM47Q96LD4 638 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 MTMR4Q9NYA4 1195 aa27.81■■■□□ 2.04
RUNDC3A-201ENST00000225441 MPHOSPH10O00566 681 aaKnown RBP27.8■■■□□ 2.04
RUNDC3A-201ENST00000225441 MEA1Q16626 185 aa27.8■■■□□ 2.04
RUNDC3A-201ENST00000225441 FIGNQ5HY92 759 aa27.8■■■□□ 2.04
RUNDC3A-201ENST00000225441 ACRBPQ8NEB7 543 aa27.8■■■□□ 2.04
RUNDC3A-201ENST00000225441 RRP36Q96EU6 259 aaKnown RBP27.8■■■□□ 2.04
RUNDC3A-201ENST00000225441 FUT8Q9BYC5 575 aa27.8■■■□□ 2.04
RUNDC3A-201ENST00000225441 ZC3H4Q9UPT8 1303 aaKnown RBP27.8■■■□□ 2.04
RUNDC3A-201ENST00000225441 DPY19L2Q6NUT2 758 aa27.79■■■□□ 2.04
RUNDC3A-201ENST00000225441 RASGRP4Q8TDF6 673 aa27.79■■■□□ 2.04
RUNDC3A-201ENST00000225441 SCAF8Q9UPN6 1271 aaKnown RBP27.79■■■□□ 2.04
RUNDC3A-201ENST00000225441 BAZ2BQ9UIF8 2168 aaKnown RBP27.79■■■□□ 2.04
RUNDC3A-201ENST00000225441 CTAGE15A4D2H0 777 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 MAP2K7O14733 419 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 TBC1D12O60347 775 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 CTAGE8P0CG41 777 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 CDK17Q00537 523 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 NEK8Q86SG6 692 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 CTAGE6Q86UF2 777 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 CTAGE4Q8IX94 777 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 P2RX5Q93086 422 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 TTC26A0AVF1 554 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 HIRAP54198 1017 aaPredicted RBP27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 NAPAP54920 295 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 GPS2Q13227 327 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 LONRF2Q1L5Z9 754 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 ANGEL2Q5VTE6 544 aaKnown RBP27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 CCDC170Q8IYT3 715 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 TEPSINQ96N21 525 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 ADARB2Q9NS39 739 aaKnown RBP27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 EXOC1Q9NV70 894 aa27.78■■■□□ 2.04
RUNDC3A-201ENST00000225441 RNF225M0QZC1 329 aaPredicted RBP27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 SEC31AO94979 1220 aaKnown RBP27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 CDC25AP30304 524 aa27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 CYP2C19P33261 490 aa27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 APOBEC3FQ8IUX4 373 aaKnown RBP27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 TRIM9Q9C026 710 aa27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 ZNHIT6Q9NWK9 470 aaKnown RBP27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 SEC63Q9UGP8 760 aaKnown RBP27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 UTRNP46939 3433 aa27.77■■■□□ 2.04
RUNDC3A-201ENST00000225441 A0A1W2PQJ5 194 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 AMPD2Q01433 879 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 SMC1AQ14683 1233 aaKnown RBP27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 ABCB5Q2M3G0 1257 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 CNNM4Q6P4Q7 775 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 FOXR2Q6PJQ5 311 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 RPGRIP1Q96KN7 1286 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 DEFB129Q9H1M3 183 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 ANKZF1Q9H8Y5 726 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 MYO6Q9UM54 1294 aa27.76■■■□□ 2.04
RUNDC3A-201ENST00000225441 ABCB11O95342 1321 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 GDF11O95390 407 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 TTLL1O95922 423 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 CYLC1P35663 651 aaPredicted RBP27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 RRP1BQ14684 758 aaKnown RBP27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 TMEM179Q6ZVK1 233 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 HDXQ7Z353 690 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 CLEC10AQ8IUN9 316 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 CSGALNACT2Q8N6G5 542 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 L3MBTL3Q96JM7 780 aaPredicted RBP27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 SLF1Q9BQI6 1058 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 STK17AQ9UEE5 414 aa27.76■■■□□ 2.03
RUNDC3A-201ENST00000225441 SMCO2A6NFE2 343 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 SASH3O75995 380 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 PLCG1P19174 1290 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 ZBED6P86452 979 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 MAP3K10Q02779 954 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 SHROOM1Q2M3G4 852 aaPredicted RBP27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 CALML4Q96GE6 196 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 DUSP9Q99956 384 aaKnown RBP27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 TUBGCP2Q9BSJ2 902 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 LRRC27Q9C0I9 530 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 GGA3Q9NZ52 723 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 MAPK8IP1Q9UQF2 711 aa27.75■■■□□ 2.03
RUNDC3A-201ENST00000225441 MCM3P25205 808 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 TTYH3Q9C0H2 523 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 PVALEFA0A1B0GWK0 134 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 TRIM49BA6NDI0 452 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms