RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 IGLV3-22A0A075B6J6 115 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 ASIC1P78348 528 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 MTMR2Q13614 643 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 FCHSD1Q86WN1 690 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 C17orf53Q8N3J3 647 aaPredicted RBP20.84■□□□□ 0.93
CTSA-201ENST00000191018 NELFBQ8WX92 580 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 GTPBP4Q9BZE4 634 aaKnown RBP20.84■□□□□ 0.93
CTSA-201ENST00000191018 NT5C3AQ9H0P0 336 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 RBBP6Q7Z6E9 1792 aaKnown RBP20.83■□□□□ 0.93
CTSA-201ENST00000191018 A0A1B0GTH6 734 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 MYMKA6NI61 221 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 VCAM1P19320 739 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 USP14P54578 494 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 CCZ1BP86790 482 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 CCZ1P86791 482 aaPredicted RBP20.83■□□□□ 0.92
CTSA-201ENST00000191018 DGKZQ13574 1117 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 DHX8Q14562 1220 aaKnown RBP20.83■□□□□ 0.92
CTSA-201ENST00000191018 PRAMEF18Q5VWM3 479 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.92
CTSA-201ENST00000191018 WRNIP1Q96S55 665 aa20.83■□□□□ 0.92
CTSA-201ENST00000191018 PTPRAP18433 802 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 GHRHRQ02643 423 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 NR1I3Q14994 352 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 COBLL1Q53SF7 1204 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 CCDC150Q8NCX0 1101 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 AGBL1Q96MI9 1066 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 LRRC27Q9C0I9 530 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 SLC38A10Q9HBR0 1119 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 RLFQ13129 1914 aa20.82■□□□□ 0.92
CTSA-201ENST00000191018 PVALEFA0A1B0GWK0 134 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 MSH4O15457 936 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 CCT6AP40227 531 aaKnown RBP20.81■□□□□ 0.92
CTSA-201ENST00000191018 HSD17B4P51659 736 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 BACE1P56817 501 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 PDE4DQ08499 809 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 SPP2Q13103 211 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 ARMCX5Q6P1M9 558 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
CTSA-201ENST00000191018 CYP2W1Q8TAV3 490 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 ZKSCAN4Q969J2 545 aaPredicted RBP20.81■□□□□ 0.92
CTSA-201ENST00000191018 KLRG1Q96E93 195 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 AS3MTQ9HBK9 375 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 EXOC1Q9NV70 894 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 CCPG1Q9ULG6 757 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 MAPK8IP1Q9UQF2 711 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 STIM1Q13586 685 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.81■□□□□ 0.92
CTSA-201ENST00000191018 UNC13DQ70J99 1090 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 EHMT1Q9H9B1 1298 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 PPP1R9AQ9ULJ8 1098 aa20.81■□□□□ 0.92
CTSA-201ENST00000191018 LRRC10BA6NIK2 292 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 PPP1R2P41236 205 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 STK4Q13043 487 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 ZNF280CQ8ND82 737 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 CLEC4DQ8WXI8 215 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 DHTKD1Q96HY7 919 aaPredicted RBP20.8■□□□□ 0.92
CTSA-201ENST00000191018 UIMC1Q96RL1 719 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 CTAGE1Q96RT6 745 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 TANGO6Q9C0B7 1094 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 PICK1Q9NRD5 415 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 ADD3Q9UEY8 706 aaKnown RBP20.8■□□□□ 0.92
CTSA-201ENST00000191018 VAV3Q9UKW4 847 aa20.8■□□□□ 0.92
CTSA-201ENST00000191018 PSMA7O14818 248 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 DDNO94850 711 aaPredicted RBP20.79■□□□□ 0.92
CTSA-201ENST00000191018 ZNF76P36508 570 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 STAT3P40763 770 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 TPD52L1Q16890 204 aaPredicted RBP20.79■□□□□ 0.92
CTSA-201ENST00000191018 HAUS3Q68CZ6 603 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 C12orf42Q96LP6 360 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 RPAP3Q9H6T3 665 aaPredicted RBP20.79■□□□□ 0.92
CTSA-201ENST00000191018 LIMA1Q9UHB6 759 aaKnown RBP20.79■□□□□ 0.92
CTSA-201ENST00000191018 FZD1Q9UP38 647 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 COBLO75128 1261 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 MED24O75448 989 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 FLOT1O75955 427 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 SKILP12757 684 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 EHHADHQ08426 723 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 TBX2Q13207 712 aaPredicted RBP20.79■□□□□ 0.92
CTSA-201ENST00000191018 NOL9Q5SY16 702 aaKnown RBP20.79■□□□□ 0.92
CTSA-201ENST00000191018 SYT17Q9BSW7 474 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 KIAA1024Q9UPX6 916 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 STK24Q9Y6E0 443 aa20.79■□□□□ 0.92
CTSA-201ENST00000191018 PAPPA2Q9BXP8 1791 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 POTEB3A0JP26 581 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 POTECB2RU33 542 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 FDX1P10109 184 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 FCER1AP12319 257 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 HOXA7P31268 230 aaPredicted RBP20.78■□□□□ 0.92
CTSA-201ENST00000191018 PMS1P54277 932 aaKnown RBP20.78■□□□□ 0.92
CTSA-201ENST00000191018 SPAG1Q07617 926 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 TTI2Q6NXR4 508 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 POTEBQ6S5H4 581 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 KIAA0895Q8NCT3 520 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 DDX12PQ92771 950 aa20.78■□□□□ 0.92
CTSA-201ENST00000191018 COL11A1P12107 1806 aaPredicted RBP20.77■□□□□ 0.92
CTSA-201ENST00000191018 TRIM49BA6NDI0 452 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 SFPQP23246 707 aaKnown RBP eCLIP20.77■□□□□ 0.92
CTSA-201ENST00000191018 RPA1P27694 616 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 SUPT20HL1Q3ZLR7 823 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms