RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Lamp1P11438 406 aaKnown RBP25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Serpinb2P12388 415 aa25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Ano6Q6P9J9 911 aa25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Fbxo2Q80UW2 297 aa25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Tubgcp2Q921G8 905 aa25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Pabpc6Q9D4E6 643 aaKnown RBP25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Pla2g6P97819 807 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 OsbpQ3B7Z2 805 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 RragbQ6NTA4 374 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Olfr832Q7TRG9 312 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Supt20hQ7TT00 530 aaKnown RBP25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Slc4a7Q8BTY2 1034 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 CnstQ8CBC4 711 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Rhobtb2Q91V93 728 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 EhhadhQ9DBM2 718 aa25.64■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Gtpbp6Q3U6U5 514 aa25.64■■□□□ 1.69
Upf3a-201ENSMUST00000043767 CrygnQ8VHL5 183 aa25.64■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Lypla2Q9WTL7 231 aa25.64■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Btbd19S4R1I0 287 aa25.64■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Gpatch11Q3UFS4 262 aa25.63■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Slc2a13Q3UHK1 637 aa25.63■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Ano10Q8BH79 659 aa25.63■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Coa7Q921H9 231 aa25.63■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Apol7aB2RT54 418 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Tpm3-rs7D3Z2H9 248 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Mroh8E9PYI4 1049 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Rfpl4bJ3QPR6 266 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Sh2d1b2Q45HK4 132 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Luc7l2Q7TNC4 392 aaKnown RBP25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Adgra1Q8C4G9 578 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Pde5aQ8CG03 865 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Appl2Q8K3G9 662 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Slc12a8Q8VI23 705 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Tmod4Q9JLH8 345 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Plagl1Q9JLQ4 704 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Igf2rQ07113 2483 aaKnown RBP25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 PhipQ8VDD9 1821 aaKnown RBP25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Eps15P42567 897 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Neurl1bQ0MW30 546 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Cep128Q8BI22 1102 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Caps2Q8BUG5 550 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Luzp1Q8R4U7 1068 aaKnown RBP25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Q91WD4 421 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 BcamQ9R069 622 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Atp12aQ9Z1W8 1035 aa25.62■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Itgb5O70309 798 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 ArP19091 899 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 NefhP19246 1090 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Rasa2P58069 847 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Slc7a1Q09143 622 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Kiaa0754Q69ZZ9 979 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Fndc3bQ6NWW9 1207 aaKnown RBP25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Lrrc8aQ80WG5 810 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Ifih1Q8R5F7 1025 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 PfasQ5SUR0 1337 aa25.61■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Lrrfip1Q3UZ39 729 aaKnown RBP25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Atg4cQ811C2 458 aa25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Cdc27A2A6Q5 825 aa25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Vmn2r71L7N2D8 855 aa25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Mettl14Q3UIK4 456 aa25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Foxd1Q61345 456 aa25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Cdca7Q9D0M2 382 aa25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Extl2Q9ES89 330 aa25.6■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Esr2O08537 530 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Sdc2P43407 202 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Creld2Q9CYA0 350 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Mrvi1Q9WUX5 899 aaKnown RBP25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 JcadQ5DTX6 1320 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Traf5P70191 558 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Kcnd1Q03719 651 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 PicalmQ7M6Y3 660 aaKnown RBP25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Trnp1Q80ZI1 223 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Kcnv2Q8CFS6 562 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Plcb1Q9Z1B3 1216 aa25.59■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Cntnap5cQ0V8T7 1305 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Arrdc4A0A0B4J1F4 415 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Gm38392E9Q2A2 434 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Pnma5Q5DTT8 618 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Zkscan4Q5SZT6 480 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Meis1Q60954 390 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Slu7Q8BHJ9 585 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Kcnk13Q8R1P5 405 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Traf7Q922B6 594 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Map3k20Q9ESL4 802 aaKnown RBP25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 CluhQ5SW19 1315 aa25.58■■□□□ 1.69
Upf3a-201ENSMUST00000043767 Ccdc78D3Z5T1 437 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Tmem132dQ76HP3 1097 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Cog5Q8C0L8 829 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 IrgqQ8VIM9 583 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Eif2ak1Q9Z2R9 619 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Thsd7bQ6P4U0 1607 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Cyp2j7A0A140T8U1 504 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Gm3095E9Q058 166 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Setd4P58467 439 aa25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Cbx1P83917 185 aaKnown RBP25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Dhx40Q6PE54 779 aaKnown RBP25.57■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Adamts10P58459 1104 aa25.56■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Nt5c2Q3V1L4 560 aa25.56■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Tfe3Q64092 572 aaKnown RBP25.56■■□□□ 1.68
Upf3a-201ENSMUST00000043767 Otud6bQ8K2H2 294 aa25.56■■□□□ 1.68
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms