RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 WDR5P61964 334 aaKnown RBP17.73■□□□□ 0.43
SRRM4-204ENST00000641899 BTNL9Q6UXG8 535 aa17.73■□□□□ 0.43
SRRM4-204ENST00000641899 LRRC8DQ7L1W4 858 aa17.73■□□□□ 0.43
SRRM4-204ENST00000641899 PURBQ96QR8 312 aaKnown RBP17.73■□□□□ 0.43
SRRM4-204ENST00000641899 MAF1Q9H063 256 aa17.73■□□□□ 0.43
SRRM4-204ENST00000641899 UBE2ZQ9H832 354 aaPredicted RBP17.73■□□□□ 0.43
SRRM4-204ENST00000641899 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
SRRM4-204ENST00000641899 TTC41PQ6P2S7 1318 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 MCM3APO60318 1980 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 TOP1P11387 765 aaKnown RBP17.72■□□□□ 0.43
SRRM4-204ENST00000641899 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
SRRM4-204ENST00000641899 SSTR3P32745 418 aaPredicted RBP17.72■□□□□ 0.43
SRRM4-204ENST00000641899 IKBKEQ14164 716 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 PTPROQ16827 1216 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 LEXMQ3ZCV2 418 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 SESTD1Q86VW0 696 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 GJD3Q8N144 294 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 KATNAL1Q9BW62 490 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 CHD7Q9P2D1 2997 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 LRRC37A2A6NM11 1700 aa17.72■□□□□ 0.43
SRRM4-204ENST00000641899 MYH4Q9Y623 1939 aa17.71■□□□□ 0.43
SRRM4-204ENST00000641899 LPXNO60711 386 aa17.71■□□□□ 0.43
SRRM4-204ENST00000641899 GJB5O95377 273 aa17.71■□□□□ 0.43
SRRM4-204ENST00000641899 SLC16A2P36021 539 aa17.71■□□□□ 0.43
SRRM4-204ENST00000641899 C7orf31Q8N865 590 aa17.71■□□□□ 0.43
SRRM4-204ENST00000641899 GDPD5Q8WTR4 605 aa17.71■□□□□ 0.43
SRRM4-204ENST00000641899 IL17RBQ9NRM6 502 aa17.71■□□□□ 0.43
SRRM4-204ENST00000641899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
SRRM4-204ENST00000641899 MYH7P12883 1935 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 FAM86C2PA6NEL3 165 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 GH1P01241 217 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 EDNRBP24530 442 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 ERVK-21P61565 698 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 RPS6P62753 249 aaKnown RBP17.7■□□□□ 0.42
SRRM4-204ENST00000641899 SLC30A10Q6XR72 485 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 UIMC1Q96RL1 719 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 KCNH6Q9H252 994 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 MTUS1Q9ULD2 1270 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 INSL6Q9Y581 213 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 WDR19Q8NEZ3 1342 aa17.7■□□□□ 0.42
SRRM4-204ENST00000641899 TCF20Q9UGU0 1960 aaKnown RBP17.7■□□□□ 0.42
SRRM4-204ENST00000641899 GBF1Q92538 1859 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 ORC4O43929 436 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 NMT2O60551 498 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 KCNA5P22460 613 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 NOVP48745 357 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 DGKDQ16760 1214 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 ZMYM1Q5SVZ6 1142 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 FAM178BQ8IXR5 827 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 RGS22Q8NE09 1264 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 SAMD11Q96NU1 681 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 SUGCTQ9HAC7 445 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
SRRM4-204ENST00000641899 PRRC2BQ5JSZ5 2229 aaKnown RBP17.69■□□□□ 0.42
SRRM4-204ENST00000641899 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.68■□□□□ 0.42
SRRM4-204ENST00000641899 ARHGEF15O94989 841 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 CXCL10P02778 98 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 RBL2Q08999 1139 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 TSHZ3Q63HK5 1081 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 ALYREFQ86V81 257 aaKnown RBP17.68■□□□□ 0.42
SRRM4-204ENST00000641899 AFG1LQ8WV93 481 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 CLEC4DQ8WXI8 215 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 SEC62Q99442 399 aaKnown RBP17.68■□□□□ 0.42
SRRM4-204ENST00000641899 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 C11orf16Q9NQ32 467 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
SRRM4-204ENST00000641899 FRMPD2Q68DX3 1309 aaPredicted RBP17.68■□□□□ 0.42
SRRM4-204ENST00000641899 EMSYQ7Z589 1322 aa17.68■□□□□ 0.42
SRRM4-204ENST00000641899 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 AMHP03971 560 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 MMP3P08254 477 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 CKBP12277 381 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 PTK7Q13308 1070 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 TIGD5Q53EQ6 642 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 GPATCH4Q5T3I0 446 aaKnown RBP17.67■□□□□ 0.42
SRRM4-204ENST00000641899 PTCRAQ6ISU1 281 aaPredicted RBP17.67■□□□□ 0.42
SRRM4-204ENST00000641899 GDF6Q6KF10 455 aaPredicted RBP17.67■□□□□ 0.42
SRRM4-204ENST00000641899 MCF2L2Q86YR7 1114 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 FBXO22Q8NEZ5 403 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 NSUN6Q8TEA1 469 aaKnown RBP17.67■□□□□ 0.42
SRRM4-204ENST00000641899 COPS5Q92905 334 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 TTC14Q96N46 770 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
SRRM4-204ENST00000641899 LINC01553A4QN01 128 aa17.66■□□□□ 0.42
SRRM4-204ENST00000641899 DEFB103AP81534 67 aa17.66■□□□□ 0.42
SRRM4-204ENST00000641899 STXBP2Q15833 593 aa17.66■□□□□ 0.42
SRRM4-204ENST00000641899 RRP12Q5JTH9 1297 aaKnown RBP17.66■□□□□ 0.42
SRRM4-204ENST00000641899 IWS1Q96ST2 819 aa17.66■□□□□ 0.42
SRRM4-204ENST00000641899 TMEM47Q9BQJ4 181 aa17.66■□□□□ 0.42
SRRM4-204ENST00000641899 UPF3BQ9BZI7 483 aaKnown RBP17.66■□□□□ 0.42
SRRM4-204ENST00000641899 GTF2IRD1Q9UHL9 959 aa17.66■□□□□ 0.42
SRRM4-204ENST00000641899 PDHBP11177 359 aa17.65■□□□□ 0.42
SRRM4-204ENST00000641899 PCP11498 1178 aaKnown RBP17.65■□□□□ 0.42
SRRM4-204ENST00000641899 SEPT14Q6ZU15 432 aa17.65■□□□□ 0.42
SRRM4-204ENST00000641899 PPP1R13LQ8WUF5 828 aa17.65■□□□□ 0.42
SRRM4-204ENST00000641899 KHSRPQ92945 711 aaKnown RBP eCLIP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms