RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 KCNB1Q14721 858 aa12.68□□□□□ -0.38
GFAP-238ENST00000640859 CDC37Q16543 378 aaPredicted RBP12.68□□□□□ -0.38
GFAP-238ENST00000640859 ZNF658Q5TYW1 1059 aaPredicted RBP12.68□□□□□ -0.38
GFAP-238ENST00000640859 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
GFAP-238ENST00000640859 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
GFAP-238ENST00000640859 ARMCX5Q6P1M9 558 aa12.68□□□□□ -0.38
GFAP-238ENST00000640859 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
GFAP-238ENST00000640859 R3HCC1Q9Y3T6 440 aaKnown RBP12.68□□□□□ -0.38
GFAP-238ENST00000640859 TMEM232C9JQI7 657 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 BMP3P12645 472 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 TECP42680 631 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 MAP3K10Q02779 954 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 PDIA5Q14554 519 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 CALCRLQ16602 461 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 CDKAL1Q5VV42 579 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 APTXQ7Z2E3 356 aaKnown RBP12.67□□□□□ -0.38
GFAP-238ENST00000640859 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
GFAP-238ENST00000640859 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
GFAP-238ENST00000640859 ZNF408Q9H9D4 720 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 PCDHA1Q9Y5I3 950 aa12.67□□□□□ -0.38
GFAP-238ENST00000640859 SYNRGQ9UMZ2 1314 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 RAD21O60216 631 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 EGFRP00533 1210 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 SKILP12757 684 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 GCFC2P16383 781 aaKnown RBP12.66□□□□□ -0.38
GFAP-238ENST00000640859 PLCG1P19174 1290 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 CDK11BP21127 795 aaKnown RBP12.66□□□□□ -0.38
GFAP-238ENST00000640859 TXKP42681 527 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 STX17P56962 302 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 C1QTNF8P60827 252 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 TBX2Q13207 712 aaPredicted RBP12.66□□□□□ -0.38
GFAP-238ENST00000640859 GRB10Q13322 594 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
GFAP-238ENST00000640859 NR1I3Q14994 352 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 KLHL10Q6JEL2 608 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 SMYD4Q8IYR2 804 aaPredicted RBP12.66□□□□□ -0.38
GFAP-238ENST00000640859 C2orf69Q8N8R5 385 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 MBOAT7Q96N66 472 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 PNMA5Q96PV4 448 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 PLIN2Q99541 437 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 AMNQ9BXJ7 453 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 DEFB129Q9H1M3 183 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 CTNND2Q9UQB3 1225 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 TMX2Q9Y320 296 aa12.66□□□□□ -0.38
GFAP-238ENST00000640859 CYP3A7-CYP3A51PA0A087WV96 503 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 A0A1B0GTH6 734 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 MEIS2O14770 477 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
GFAP-238ENST00000640859 RHOBTB3O94955 611 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 CYP3A7P24462 503 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 USP11P51784 963 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 TMEM266Q2M3C6 531 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 KIAA1755Q5JYT7 1200 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 MCTP2Q6DN12 878 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 FBXO11Q86XK2 927 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 ADSSL1Q8N142 457 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 RASSF8Q8NHQ8 419 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 ACER1Q8TDN7 264 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 HAS1Q92839 578 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 GLIS2Q9BZE0 524 aaPredicted RBP12.65□□□□□ -0.38
GFAP-238ENST00000640859 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 LRWD1Q9UFC0 647 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 GDAQ9Y2T3 454 aa12.65□□□□□ -0.38
GFAP-238ENST00000640859 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 CELF2O95319 508 aaKnown RBP12.64□□□□□ -0.39
GFAP-238ENST00000640859 TPM2P07951 284 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 SFPQP23246 707 aaKnown RBP eCLIP12.64□□□□□ -0.39
GFAP-238ENST00000640859 PRCPP42785 496 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 ECE1P42892 770 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 KCNJ6P48051 423 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 SNAP25P60880 206 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 FKBP1BP68106 108 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 PAK1Q13153 545 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 RASA3Q14644 834 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 TMEM119Q4V9L6 283 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 HSP90AA4PQ58FG1 418 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 DNTTIP2Q5QJE6 756 aaKnown RBP12.64□□□□□ -0.39
GFAP-238ENST00000640859 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 USP17L6PQ6QN14 398 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 MOXD1Q6UVY6 613 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 NELFBQ8WX92 580 aa12.64□□□□□ -0.39
GFAP-238ENST00000640859 CRYGNQ8WXF5 182 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms