RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 TRIM61Q5EBN2 209 aa8.56□□□□□ -1.04
RFC1-217ENST00000639695 ZNF513Q8N8E2 541 aaPredicted RBP8.56□□□□□ -1.04
RFC1-217ENST00000639695 EMC9Q9Y3B6 208 aa8.56□□□□□ -1.04
RFC1-217ENST00000639695 GRIA2P42262 883 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 CTSWP56202 376 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 EGR3Q06889 387 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 TRIM59Q8IWR1 403 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 KCTD13Q8WZ19 329 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 MRGPRX3Q96LB0 322 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 GP6Q9HCN6 339 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 SLC52A1Q9NWF4 448 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 EBF1Q9UH73 591 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 DUSP13Q9UII6 198 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 FBXL21Q9UKT6 434 aa8.55□□□□□ -1.04
RFC1-217ENST00000639695 DIS3Q9Y2L1 958 aaKnown RBP8.55□□□□□ -1.04
RFC1-217ENST00000639695 THRAP3Q9Y2W1 955 aaKnown RBP8.55□□□□□ -1.04
RFC1-217ENST00000639695 CCDC194A0A1B0GVG4 234 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 OPA1O60313 960 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 ASLP04424 464 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 CAPNS1P04632 268 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 ETV3P41162 512 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 UBE2R2Q712K3 238 aaPredicted RBP8.54□□□□□ -1.04
RFC1-217ENST00000639695 CERS3Q8IU89 383 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 ARHGEF39Q8N4T4 335 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 DTWD2Q8NBA8 298 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 ADCY4Q8NFM4 1077 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 WDR66Q8TBY9 1149 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 PTPRN2Q92932 1015 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 C8orf48Q96LL4 319 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 MAGEB10Q96LZ2 347 aaPredicted RBP8.54□□□□□ -1.04
RFC1-217ENST00000639695 KREMEN1Q96MU8 473 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 PCDHB12Q9Y5F1 795 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 PCDHA11Q9Y5I1 949 aa8.54□□□□□ -1.04
RFC1-217ENST00000639695 B4E1Z4 1266 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 PRC1O43663 620 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 BRINP1O60477 761 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 LRRN2O75325 713 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 DNAJC8O75937 253 aaPredicted RBP8.53□□□□□ -1.04
RFC1-217ENST00000639695 MAP4K4O95819 1239 aaPredicted RBP8.53□□□□□ -1.04
RFC1-217ENST00000639695 POU3F2P20265 443 aaPredicted RBP8.53□□□□□ -1.04
RFC1-217ENST00000639695 HOXC12P31275 282 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 KCNJ6P48051 423 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 STRN3Q13033 797 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 TTF1Q15361 905 aaPredicted RBP8.53□□□□□ -1.04
RFC1-217ENST00000639695 RNF219Q5W0B1 726 aaPredicted RBP8.53□□□□□ -1.04
RFC1-217ENST00000639695 NECAB2Q7Z6G3 386 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 ZNF605Q86T29 641 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 TSPYL5Q86VY4 417 aaPredicted RBP8.53□□□□□ -1.04
RFC1-217ENST00000639695 PDZD8Q8NEN9 1154 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 SLC7A14Q8TBB6 771 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 LGR4Q9BXB1 951 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 GPR62Q9BZJ7 368 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 TRIM39Q9HCM9 518 aa8.53□□□□□ -1.04
RFC1-217ENST00000639695 PLEKHD1A6NEE1 506 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 DLX3O60479 287 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 KCNH1O95259 989 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 RASGRP1O95267 797 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 GALK1P51570 392 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 DLG4P78352 724 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 DHCR24Q15392 516 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 BRAPQ7Z569 592 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 RELTQ969Z4 430 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 ASPNQ9BXN1 380 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 SLC5A4Q9NY91 659 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 CGGBP1Q9UFW8 167 aaPredicted RBP8.52□□□□□ -1.05
RFC1-217ENST00000639695 TNPO3Q9Y5L0 923 aaKnown RBP8.52□□□□□ -1.05
RFC1-217ENST00000639695 FHOD1Q9Y613 1164 aa8.52□□□□□ -1.05
RFC1-217ENST00000639695 TBX1O43435 398 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 EYA4O95677 639 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 EFEMP2O95967 443 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 CPP00450 1065 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 C6orf222P0C671 652 aaPredicted RBP8.51□□□□□ -1.05
RFC1-217ENST00000639695 IGFALSP35858 605 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 MAP4K2Q12851 820 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 NBPF9Q3BBW0 867 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 GTF2IRD2BQ6EKJ0 949 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 MAMDC2Q7Z304 686 aaPredicted RBP8.51□□□□□ -1.05
RFC1-217ENST00000639695 STRA8Q7Z7C7 330 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 GTF2IRD2Q86UP8 949 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 CCDC146Q8IYE0 955 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 GSTCDQ8NEC7 633 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 BTN2A2Q8WVV5 523 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 SGPP1Q9BX95 441 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 TRIT1Q9H3H1 467 aaKnown RBP8.51□□□□□ -1.05
RFC1-217ENST00000639695 GCM1Q9NP62 436 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 GABBR1Q9UBS5 961 aa8.51□□□□□ -1.05
RFC1-217ENST00000639695 KIF3BO15066 747 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 SNRPB2P08579 225 aaKnown RBP8.5□□□□□ -1.05
RFC1-217ENST00000639695 NAT1P18440 290 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 TBX4P57082 545 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 ZNF445P59923 1031 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 PPP2R5AQ15172 486 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 IRF2BP1Q8IU81 584 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 WDR75Q8IWA0 830 aaKnown RBP8.5□□□□□ -1.05
RFC1-217ENST00000639695 SYTL5Q8TDW5 730 aaPredicted RBP8.5□□□□□ -1.05
RFC1-217ENST00000639695 USP7Q93009 1102 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 MYH16Q9H6N6 1097 aa8.5□□□□□ -1.05
RFC1-217ENST00000639695 PARD6AQ9NPB6 346 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms