RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CCDC42Q96M95 316 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 TSNARE1Q96NA8 513 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 FOXP3Q9BZS1 431 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 C8orf33Q9H7E9 229 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 KIF17Q9P2E2 1029 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 RSPH10B2B2RC85 870 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 ST18O60284 1047 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 RSPH10BP0C881 870 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 PRKAR2AP13861 404 aaKnown RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 TPD52L1Q16890 204 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 PPP6R3Q5H9R7 873 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 DEPTORQ8TB45 409 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 RTEL1Q9NZ71 1219 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 VTI1BQ9UEU0 232 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 GRID1Q9ULK0 1009 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 WRNQ14191 1432 aaPredicted RBP eCLIP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 PALM3A6NDB9 673 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 RTCAO00442 366 aaKnown RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 GUCA1CO95843 209 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 SLC5A1P13866 664 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 GFAPP14136 432 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 ATP6V1B1P15313 513 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 FCRLBQ6BAA4 426 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 JAZF1Q86VZ6 243 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 DDI1Q8WTU0 396 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 FAM167BQ9BTA0 163 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 GNPATO15228 680 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 NFKBIAP25963 317 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 HNF1BP35680 557 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 RCAN1P53805 252 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 SEC13P55735 322 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 OLFM4Q6UX06 510 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 ATP8B4Q8TF62 1192 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 CCNB3Q8WWL7 1395 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 NCAM1P13591 858 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 CABP7Q86V35 215 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 SPARTQ8N0X7 666 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 KCNN1Q92952 543 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 FNBP1Q96RU3 617 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 NAT10Q9H0A0 1025 aaKnown RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 NUMA1Q14980 2115 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 WDR46O15213 610 aaKnown RBP4.7□□□□□ -1.66
SCN3A-209ENST00000639244 ALDH3A1P30838 453 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 VPS53Q5VIR6 699 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 GAS2L3Q86XJ1 694 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 GPR108Q9NPR9 543 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 STARD7Q9NQZ5 370 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 ATP6V1HQ9UI12 483 aa4.7□□□□□ -1.66
SCN3A-209ENST00000639244 SYCE1LA8MT33 242 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 GOLGA8KD6RF30 607 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 POTEB2H3BUK9 544 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ZC3H11AO75152 810 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 EPB42P16452 691 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ATP5JP18859 108 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 MRPS25P82663 173 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 DRP2Q13474 957 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ZNF746Q6NUN9 644 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 C8orf74Q6P047 294 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 CCDC129Q6ZRS4 1044 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ATP6V1G3Q96LB4 118 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 PALMDQ9NP74 551 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ZNF624Q9P2J8 865 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 MBD2Q9UBB5 411 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 MYO1AQ9UBC5 1043 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SCAMP3O14828 347 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 RASGRP1O95267 797 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 DLATP10515 647 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ACADVLP49748 655 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 KLHL30Q0D2K2 578 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 DHX34Q14147 1143 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ZSCAN23Q3MJ62 389 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ANKDD1AQ495B1 522 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 LTV1Q96GA3 475 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 FARSBQ9NSD9 589 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 MRPL39Q9NYK5 338 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 CHMP2BQ9UQN3 213 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SCG2P13521 617 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 DDIT3P35638 169 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 OSCP1Q8WVF1 389 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ART5Q96L15 291 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 RUNDC3BQ96NL0 473 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 AIFM2Q9BRQ8 373 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 OXCT2Q9BYC2 517 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 OSBPL2Q9H1P3 480 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 PFDN4Q9NQP4 134 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 PNMA8BQ9ULN7 279 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 WDR91A4D1P6 747 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 TLR3O15455 904 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 EPB41P11171 864 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 HSPA6P17066 643 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 IL32P24001 234 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 HSD17B2P37059 387 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 PLTPP55058 493 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SP140Q13342 867 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 FNIP1Q8TF40 1166 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 KIFAP3Q92845 792 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 RTFDC1Q9BY42 306 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 UPF3BQ9BZI7 483 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 VPS11Q9H270 941 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms