RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 LRIT3Q3SXY7 679 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 CASC1Q6TDU7 716 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 Q7L0L9 218 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 MCF2L2Q86YR7 1114 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 CMTR1Q8N1G2 835 aaKnown RBP20.59■□□□□ 0.89
PNKP-230ENST00000638016 OR6J1Q8NGC5 347 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 ZFP91Q96JP5 570 aaPredicted RBP20.59■□□□□ 0.89
PNKP-230ENST00000638016 TCEANC2Q96MN5 208 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 TOX2Q96NM4 488 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 RMDN3Q96TC7 470 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 TBX21Q9UL17 535 aa20.59■□□□□ 0.89
PNKP-230ENST00000638016 DCDC2CA8MYV0 355 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 CDC45O75419 566 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 PLEKHA8P1O95397 391 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 RAG1P15918 1043 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 MCM5P33992 734 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 HSD17B4P51659 736 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 SEPT14Q6ZU15 432 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 RASEFQ8IZ41 740 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 PXMP2Q9NR77 195 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 Q9Y3F1 56 aa20.58■□□□□ 0.89
PNKP-230ENST00000638016 MYL3P08590 195 aa20.57■□□□□ 0.88
PNKP-230ENST00000638016 TXNP10599 105 aaKnown RBP20.57■□□□□ 0.88
PNKP-230ENST00000638016 ITGA7Q13683 1181 aa20.57■□□□□ 0.88
PNKP-230ENST00000638016 ARHGEF16Q5VV41 709 aa20.57■□□□□ 0.88
PNKP-230ENST00000638016 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
PNKP-230ENST00000638016 IL31RAQ8NI17 732 aa20.57■□□□□ 0.88
PNKP-230ENST00000638016 NSUN6Q8TEA1 469 aaKnown RBP20.57■□□□□ 0.88
PNKP-230ENST00000638016 SCFD2Q8WU76 684 aa20.57■□□□□ 0.88
PNKP-230ENST00000638016 PPP1R12CQ9BZL4 782 aa20.57■□□□□ 0.88
PNKP-230ENST00000638016 DDAH1O94760 285 aa20.56■□□□□ 0.88
PNKP-230ENST00000638016 GHRHRQ02643 423 aa20.56■□□□□ 0.88
PNKP-230ENST00000638016 LY6KQ17RY6 165 aa20.56■□□□□ 0.88
PNKP-230ENST00000638016 ADCK5Q3MIX3 580 aa20.56■□□□□ 0.88
PNKP-230ENST00000638016 CCDC62Q6P9F0 684 aa20.56■□□□□ 0.88
PNKP-230ENST00000638016 SLC43A3Q8NBI5 491 aa20.56■□□□□ 0.88
PNKP-230ENST00000638016 SCN10AQ9Y5Y9 1956 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 UMODL1Q5DID0 1318 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 PNMA6FA0A0J9YX94 578 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 ZEB2O60315 1214 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 CD4P01730 458 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 PURAQ00577 322 aaKnown RBP20.55■□□□□ 0.88
PNKP-230ENST00000638016 FCHSD1Q86WN1 690 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 SRBD1Q8N5C6 995 aaKnown RBP20.55■□□□□ 0.88
PNKP-230ENST00000638016 CTCFLQ8NI51 663 aaPredicted RBP20.55■□□□□ 0.88
PNKP-230ENST00000638016 TMEM87BQ96K49 555 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 MPHOSPH6Q99547 160 aaKnown RBP20.55■□□□□ 0.88
PNKP-230ENST00000638016 TRPV6Q9H1D0 765 aa20.55■□□□□ 0.88
PNKP-230ENST00000638016 MROH7Q68CQ1 1323 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 hCG_1642624A0A1W2PR95 340 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 CCDC69A6NI79 296 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 RBAK-RBAKDNI3L0D1 243 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 SORBS3O60504 671 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 B4GALT4O60513 344 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 TIMP1P01033 207 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 NR3C2P08235 984 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
PNKP-230ENST00000638016 TTLL4Q14679 1199 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 PDCD2LQ9BRP1 358 aa20.54■□□□□ 0.88
PNKP-230ENST00000638016 CABYRO75952 493 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 RGS20O76081 388 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 CPA1P15085 419 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 CYP2C18P33260 490 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 FPGSQ05932 587 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 STXBP2Q15833 593 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 AFG1LQ8WV93 481 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 IWS1Q96ST2 819 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 MYH7BA7E2Y1 1941 aa20.53■□□□□ 0.88
PNKP-230ENST00000638016 B4DLN1 442 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 NKRFO15226 690 aaKnown RBP eCLIP20.52■□□□□ 0.88
PNKP-230ENST00000638016 LIFRP42702 1097 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 CPT1AP50416 773 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 MRPL12P52815 198 aaKnown RBP20.52■□□□□ 0.88
PNKP-230ENST00000638016 ARHGAP1Q07960 439 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 PGM5Q15124 567 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 CCDC82Q8N4S0 544 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 GPKOWQ92917 476 aaPredicted RBP eCLIP20.52■□□□□ 0.88
PNKP-230ENST00000638016 NEK1Q96PY6 1258 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 MTA3Q9BTC8 594 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 SPZ1Q9BXG8 430 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 MAF1Q9H063 256 aa20.52■□□□□ 0.88
PNKP-230ENST00000638016 TRMT13Q9NUP7 481 aaKnown RBP20.52■□□□□ 0.88
PNKP-230ENST00000638016 A6NJR5 290 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 GCOM1H8Y6P7 765 aaPredicted RBP20.51■□□□□ 0.87
PNKP-230ENST00000638016 TLR3O15455 904 aaKnown RBP20.51■□□□□ 0.87
PNKP-230ENST00000638016 POLR2MP0CAP2 368 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 CSF2RAP15509 400 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 KIF5BP33176 963 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 CHMP4BP1P59074 171 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 RNF20Q5VTR2 975 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 DEFB123Q8N688 67 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 MAP3K14Q99558 947 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 POLR3EQ9NVU0 708 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 BRPF3Q9ULD4 1205 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 SLC12A7Q9Y666 1083 aa20.51■□□□□ 0.87
PNKP-230ENST00000638016 MMP3P08254 477 aa20.5■□□□□ 0.87
PNKP-230ENST00000638016 ACRP10323 421 aa20.5■□□□□ 0.87
PNKP-230ENST00000638016 EXOSC10Q01780 885 aaKnown RBP20.5■□□□□ 0.87
PNKP-230ENST00000638016 NBPF20Q3BBV1 942 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms