RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	USP17L17	D6RBQ6	530 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	USP17L19	D6RCP7	530 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	USP17L20	D6RJB6	530 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	USP17L24	Q0WX57	530 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CTR9	Q6PD62	1173 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	USP17L6P	Q6QN14	398 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CCDC25	Q86WR0	208 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ENAH	Q8N8S7	591 aa	Predicted RBP	15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	LINC00301	Q8NCQ3	95 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	DESI2	Q9BSY9	194 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	POLL	Q9UGP5	575 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	HERC5	Q9UII4	1024 aa	Known RBP	15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	SPOP	O43791	374 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	MMP1	P03956	469 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	FCER1A	P12319	257 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CCDC97	Q96F63	343 aa	Predicted RBP	15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	LARS	Q9P2J5	1176 aa	Known RBP	15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	LRFN2	Q9ULH4	789 aa		15.82	■□□□□ 0.12
NEDD4L-238	ENST00000635997	SMIM23	A6NLE4	172 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	SLU7	O95391	586 aa	Known RBP	15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CDC37	Q16543	378 aa	Predicted RBP	15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	DPCR1	Q3MIW9	517 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ODR4	Q5SWX8	454 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	HACE1	Q8IYU2	909 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	NRK	Q7Z2Y5	1582 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ATRN	O75882	1429 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	GTF2A1	P52655	376 aa	Predicted RBP	15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	NBPF9	Q3BBW0	867 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	TYW1B	Q6NUM6	668 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	RGMB	Q6NW40	437 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ERO1B	Q86YB8	467 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	FOXP1	Q9H334	677 aa	Predicted RBP	15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	RGS17	Q9UGC6	210 aa	Predicted RBP	15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	TLDC2	A0PJX2	215 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	STX10	O60499	249 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	KLHL30	Q0D2K2	578 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	DPF2	Q92785	391 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ERO1A	Q96HE7	468 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CAPNS2	Q96L46	248 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	PANK4	Q9NVE7	773 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CAMTA1	Q9Y6Y1	1673 aa		15.81	■□□□□ 0.12
NEDD4L-238	ENST00000635997	PPP1R2	P41236	205 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	FAM151A	Q8WW52	585 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	AKT1S1	Q96B36	256 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	NUDT12	Q9BQG2	462 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ZNF577	Q9BSK1	485 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	EXOC7	Q9UPT5	735 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	COMMD10	Q9Y6G5	202 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997		K7ENM7	598 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ZBTB22	O15209	634 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CASP1	P29466	404 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	DGKH	Q86XP1	1220 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	PPP1R16B	Q96T49	567 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	TEKT3	Q9BXF9	490 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	GPRC5D	Q9NZD1	345 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	SYDE2	Q5VT97	1194 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	OTUD6A	Q7L8S5	288 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ANKRD13C	Q8N6S4	541 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	PROCA1	Q8NCQ7	364 aa	Predicted RBP	15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ARFGAP3	Q9NP61	516 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	FOS	P01100	380 aa	Predicted RBP	15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ZBTB33	Q86T24	672 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	IPO4	Q8TEX9	1081 aa	Known RBP	15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	FAM193B	Q96PV7	902 aa	Predicted RBP	15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ST7	Q9NRC1	585 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	UST	Q9Y2C2	406 aa		15.8	■□□□□ 0.12
NEDD4L-238	ENST00000635997	RPN1	P04843	607 aa	Known RBP	15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CDC27	P30260	824 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	APLP1	P51693	650 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	SLC10A5	Q5PT55	438 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	FAM83B	Q5T0W9	1011 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	STOX1	Q6ZVD7	989 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	TAF6L	Q9Y6J9	622 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	RGL2	O15211	777 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ABCB4	P21439	1286 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	C10orf67	Q8IYJ2	551 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ZNF280C	Q8ND82	737 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ARMCX3	Q9UH62	379 aa	Predicted RBP	15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	UBR1	Q8IWV7	1749 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	ROBO1	Q9Y6N7	1651 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	MYOM1	P52179	1685 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CKAP4	Q07065	602 aa	Known RBP	15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	GOLGA8F	Q08AF8	430 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	GOLGA8DP	Q0D2H9	430 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	DGKZ	Q13574	1117 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CYP4F22	Q6NT55	531 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	CCDC84	Q86UT8	332 aa	Predicted RBP	15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	OXER1	Q8TDS5	423 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	IL25	Q9H293	177 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	SERPINA10	Q9UK55	444 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	PRDM4	Q9UKN5	801 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	RABGAP1	Q9Y3P9	1069 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	BCL9L	Q86UU0	1499 aa		15.79	■□□□□ 0.12
NEDD4L-238	ENST00000635997	KCNJ18	B7U540	433 aa		15.78	■□□□□ 0.12
NEDD4L-238	ENST00000635997	MYL3	P08590	195 aa		15.78	■□□□□ 0.12
NEDD4L-238	ENST00000635997	XRCC5	P13010	732 aa	Known RBP	15.78	■□□□□ 0.12
NEDD4L-238	ENST00000635997	MTMR2	Q13614	643 aa		15.78	■□□□□ 0.12
NEDD4L-238	ENST00000635997	KCNJ12	Q14500	433 aa		15.78	■□□□□ 0.12
NEDD4L-238	ENST00000635997	DNAJC21	Q5F1R6	531 aa	Known RBP	15.78	■□□□□ 0.12
NEDD4L-238	ENST00000635997	SNRNP48	Q6IEG0	339 aa	Known RBP	15.78	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms