RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 LGALS16A8MUM7 142 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 PPIP5K2O43314 1243 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 ENTPD3O75355 529 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 GDF11O95390 407 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 MCM6Q14566 821 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 CSGALNACT2Q8N6G5 542 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 ATRNL1Q5VV63 1379 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 MARCH6O60337 910 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 FCER1AP12319 257 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 FECHP22830 423 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 COBLL1Q53SF7 1204 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 RAD9BQ6WBX8 426 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 DUSP9Q99956 384 aaKnown RBP13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 GNG11P61952 73 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 GMCL1P1Q8NEA9 526 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 RAD54LQ92698 747 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 ADGRG1Q9Y653 693 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 MYMKA6NI61 221 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 PES1O00541 588 aaKnown RBP13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 HAS1Q92839 578 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 V9GYY5 206 aaPredicted RBP13.68□□□□□ -0.22
PHACTR4-206ENST00000632421 PVALEFA0A1B0GWK0 134 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 A0A1W2PQC6 194 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 F5H6K3 240 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 FANCGO15287 622 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 CASQ1P31415 396 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 KLRC3Q07444 240 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 TMEM119Q4V9L6 283 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 ANKRD40Q6AI12 368 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 UNC13DQ70J99 1090 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 TMTC1Q8IUR5 882 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 FAM114A1Q8IWE2 563 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 LRRC27Q9C0I9 530 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 YDJCA8MPS7 323 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 C21orf2O43822 256 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 URI1O94763 535 aaPredicted RBP13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 KIAA0895Q8NCT3 520 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 GMCL1Q96IK5 515 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 PRMT6Q96LA8 375 aaPredicted RBP13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 NUDT12Q9BQG2 462 aa13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 MRPL44Q9H9J2 332 aaKnown RBP13.67□□□□□ -0.22
PHACTR4-206ENST00000632421 EZH2Q15910 746 aaKnown RBP13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 ANO3Q9BYT9 981 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 NDUFB10O96000 172 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 GH2P01242 217 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 KRT9P35527 623 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 CYP26C1Q6V0L0 522 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 WDR24Q96S15 920 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 CSRNP1Q96S65 589 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 TUBGCP2Q9BSJ2 902 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 SLC39A2Q9NP94 309 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 RNF225M0QZC1 329 aaPredicted RBP13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 DNM2P50570 870 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 USP11P51784 963 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 ELF2Q15723 593 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 CNOT6LQ96LI5 555 aaKnown RBP13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 AMNQ9BXJ7 453 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 TMEM51Q9NW97 253 aa13.66□□□□□ -0.22
PHACTR4-206ENST00000632421 KIF20AO95235 890 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 AP3B2Q13367 1082 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 TMOD2Q9NZR1 351 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 ERVK-24P63145 666 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 KCNK18Q7Z418 384 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 GJA10Q969M2 543 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 KDM3AQ9Y4C1 1321 aa13.65□□□□□ -0.22
PHACTR4-206ENST00000632421 B4DLN1 442 aa13.65□□□□□ -0.23
PHACTR4-206ENST00000632421 HOXA7P31268 230 aaPredicted RBP13.65□□□□□ -0.23
PHACTR4-206ENST00000632421 MCTP2Q6DN12 878 aa13.65□□□□□ -0.23
PHACTR4-206ENST00000632421 FBXO11Q86XK2 927 aa13.65□□□□□ -0.23
PHACTR4-206ENST00000632421 DDX12PQ92771 950 aa13.65□□□□□ -0.23
PHACTR4-206ENST00000632421 TRERF1Q96PN7 1200 aa13.65□□□□□ -0.23
PHACTR4-206ENST00000632421 CAMKK2Q96RR4 588 aa13.65□□□□□ -0.23
PHACTR4-206ENST00000632421 LZTFL1Q9NQ48 299 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms