RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 HAUS4Q9H6D7 363 aa9.02□□□□□ -0.97
GPC3-204ENST00000631057 VAT1LQ9HCJ6 419 aa9.02□□□□□ -0.97
GPC3-204ENST00000631057 ZNHIT6Q9NWK9 470 aaKnown RBP9.02□□□□□ -0.97
GPC3-204ENST00000631057 ANKRD31Q8N7Z5 1873 aa9.02□□□□□ -0.97
GPC3-204ENST00000631057 A0A0U1RQJ8 604 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 PVALEFA0A1B0GWK0 134 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 USP17L5A8MUK1 530 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 C6orf229H3BNL8 230 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 SEC31AO94979 1220 aaKnown RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 FGFR1OPO95684 399 aaKnown RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 TBC1D8O95759 1140 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 TUBBP07437 444 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 PDHBP11177 359 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 GYS1P13807 737 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 CYLC1P35663 651 aaPredicted RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 TECP42680 631 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 MTIF2P46199 727 aaKnown RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 KRT83P78385 493 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 ZBED6P86452 979 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 CALCRLQ16602 461 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 MEA1Q16626 185 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 FAM182BQ5T319 152 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 ZNF662Q6ZS27 426 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 SV2BQ7L1I2 683 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 CCDC170Q8IYT3 715 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 LRRC15Q8TF66 581 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 ATRIPQ8WXE1 791 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 CNOT6LQ96LI5 555 aaKnown RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 MMTAG2Q9BU76 263 aaKnown RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 LRRC27Q9C0I9 530 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 MTMR4Q9NYA4 1195 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 BIN2Q9UBW5 565 aaPredicted RBP9.01□□□□□ -0.97
GPC3-204ENST00000631057 POLLQ9UGP5 575 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 SERPINA10Q9UK55 444 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 DAGLAQ9Y4D2 1042 aa9.01□□□□□ -0.97
GPC3-204ENST00000631057 ATAD5Q96QE3 1844 aa9□□□□□ -0.97
GPC3-204ENST00000631057 IGKV6D-41A0A0C4DH26 115 aa9□□□□□ -0.97
GPC3-204ENST00000631057 A0A1W2PQJ5 194 aa9□□□□□ -0.97
GPC3-204ENST00000631057 CTAGE15A4D2H0 777 aa9□□□□□ -0.97
GPC3-204ENST00000631057 B4DLN1 442 aa9□□□□□ -0.97
GPC3-204ENST00000631057 ERLIN1O75477 346 aa9□□□□□ -0.97
GPC3-204ENST00000631057 IPO7O95373 1038 aaKnown RBP9□□□□□ -0.97
GPC3-204ENST00000631057 CTAGE8P0CG41 777 aa9□□□□□ -0.97
GPC3-204ENST00000631057 SNHG28P0DPA3 235 aa9□□□□□ -0.97
GPC3-204ENST00000631057 TRIM21P19474 475 aaKnown RBP9□□□□□ -0.97
GPC3-204ENST00000631057 TBC1D8BQ0IIM8 1120 aa9□□□□□ -0.97
GPC3-204ENST00000631057 PDIA5Q14554 519 aa9□□□□□ -0.97
GPC3-204ENST00000631057 FIGNQ5HY92 759 aa9□□□□□ -0.97
GPC3-204ENST00000631057 SLC27A3Q5K4L6 730 aa9□□□□□ -0.97
GPC3-204ENST00000631057 FKBP15Q5T1M5 1219 aa9□□□□□ -0.97
GPC3-204ENST00000631057 KIAA1328Q86T90 577 aa9□□□□□ -0.97
GPC3-204ENST00000631057 CTAGE6Q86UF2 777 aa9□□□□□ -0.97
GPC3-204ENST00000631057 CTAGE4Q8IX94 777 aa9□□□□□ -0.97
GPC3-204ENST00000631057 MSANTD4Q8NCY6 345 aa9□□□□□ -0.97
GPC3-204ENST00000631057 HNRNPLLQ8WVV9 542 aaKnown RBP9□□□□□ -0.97
GPC3-204ENST00000631057 CCDC97Q96F63 343 aaPredicted RBP9□□□□□ -0.97
GPC3-204ENST00000631057 MTMR9Q96QG7 549 aa9□□□□□ -0.97
GPC3-204ENST00000631057 ERGIC2Q96RQ1 377 aa9□□□□□ -0.97
GPC3-204ENST00000631057 CHP1Q99653 195 aa9□□□□□ -0.97
GPC3-204ENST00000631057 UBA5Q9GZZ9 404 aa9□□□□□ -0.97
GPC3-204ENST00000631057 GBP3Q9H0R5 595 aa9□□□□□ -0.97
GPC3-204ENST00000631057 LRWD1Q9UFC0 647 aa9□□□□□ -0.97
GPC3-204ENST00000631057 SWAP70Q9UH65 585 aa9□□□□□ -0.97
GPC3-204ENST00000631057 PUF60Q9UHX1 559 aaKnown RBP9□□□□□ -0.97
GPC3-204ENST00000631057 ZHX1Q9UKY1 873 aaPredicted RBP9□□□□□ -0.97
GPC3-204ENST00000631057 MYO6Q9UM54 1294 aa9□□□□□ -0.97
GPC3-204ENST00000631057 REXO2Q9Y3B8 237 aaKnown RBP9□□□□□ -0.97
GPC3-204ENST00000631057 ABCB11O95342 1321 aa9□□□□□ -0.97
GPC3-204ENST00000631057 PNMA6FA0A0J9YX94 578 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 KLRG2A4D1S0 409 aaPredicted RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 PSMD14O00487 310 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 TTLL1O95922 423 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 TXKP42681 527 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 CDK17Q00537 523 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 AMPD2Q01433 879 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 GABPAQ06546 454 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 ZNF543Q08ER8 600 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 STK4Q13043 487 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 GRB10Q13322 594 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 KRT79Q5XKE5 535 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 ANKRD40Q6AI12 368 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 CENPPQ6IPU0 288 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 FOXR2Q6PJQ5 311 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 DPP8Q6V1X1 898 aaPredicted RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 UNC13DQ70J99 1090 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 ZSCAN29Q8IWY8 852 aaPredicted RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 SP8Q8IXZ3 490 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 DDX27Q96GQ7 796 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 NAP1L4Q99733 375 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 NOC4LQ9BVI4 516 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 UBXN6Q9BZV1 441 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 TTYH3Q9C0H2 523 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 COA1Q9GZY4 146 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 EPC1Q9H2F5 836 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 ZSWIM4Q9H7M6 989 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 RIC8AQ9NPQ8 531 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 LRRC4BQ9NT99 713 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 TMEM260Q9NX78 707 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 RAB21Q9UL25 225 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms