RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 IFT80Q9P2H3 777 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 FAM184BQ9ULE4 1060 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 BOLA1Q9Y3E2 137 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 EPN1Q9Y6I3 576 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 FSD2A1L4K1 749 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 KIAA0754O94854 1291 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 NPTXRO95502 500 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 HSPA4P34932 840 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 IARSP41252 1262 aaKnown RBP5.53□□□□□ -1.52
SDCBP-213ENST00000630925 CCDC85BQ15834 202 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-213ENST00000630925 ANKRD39Q53RE8 183 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 VARS2Q5ST30 1063 aaKnown RBP5.53□□□□□ -1.52
SDCBP-213ENST00000630925 FAM205BPQ63HN1 556 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 NLRP8Q86W28 1048 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 IQCA1Q86XH1 822 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 FAM178BQ8IXR5 827 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 GOLM1Q8NBJ4 401 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 BICD2Q8TD16 824 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 TRIM63Q969Q1 353 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 MYO19Q96H55 970 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 NT5C1BQ96P26 610 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 FAM193BQ96PV7 902 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-213ENST00000630925 PI4K2AQ9BTU6 479 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 MENTQ9BUN1 341 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 BCO2Q9BYV7 579 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 MTFR1LQ9H019 292 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 KIAA1683Q9H0B3 1180 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 ESF1Q9H501 851 aaKnown RBP5.53□□□□□ -1.52
SDCBP-213ENST00000630925 BRD9Q9H8M2 597 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 STARD7Q9NQZ5 370 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 VPS45Q9NRW7 570 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 GGA3Q9NZ52 723 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 TNIKQ9UKE5 1360 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 UHRF1BP1Q6BDS2 1440 aa5.53□□□□□ -1.52
SDCBP-213ENST00000630925 UPK3BL1B0FP48 263 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 UPK3BL2E5RIL1 263 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 K7ESF4 209 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 MAFO75444 373 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 DNAJC8O75937 253 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PRKD3O94806 890 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 SLITRK5O94991 958 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 TBX18O95935 607 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 MT-ND3P03897 115 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 ELF1P32519 619 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 ATXN1P54253 815 aaKnown RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PIP4K2BP78356 416 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 ZNF252P-AS1Q0IIN9 211 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 USP4Q13107 963 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 SCARB2Q14108 478 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 SF3B3Q15393 1217 aaKnown RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 INF2Q27J81 1249 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 VWA3BQ502W6 1294 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PRR16Q569H4 304 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 CCDC149Q6ZUS6 474 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 LSRQ86X29 649 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 VSIG1Q86XK7 387 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 MAML1Q92585 1016 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 BAG1Q99933 345 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 NCAPGQ9BPX3 1015 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 C7orf25Q9BPX7 421 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 LZTS2Q9BRK4 669 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 GPATCH1Q9BRR8 931 aaKnown RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 IRAK4Q9NWZ3 460 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 C6orf203Q9P0P8 240 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 TLR6Q9Y2C9 796 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 DAGLAQ9Y4D2 1042 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 SQORQ9Y6N5 450 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 TISP43B9A030 160 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 B9A039 149 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PF4P02776 101 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 MYBL2P10244 700 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 BPIP17213 487 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 RECQLP46063 649 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 DCAF7P61962 342 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 WTAPQ15007 396 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PCBP2Q15366 365 aaKnown RBP eCLIP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 ASIC2Q16515 512 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PLA2G4EQ3MJ16 856 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 SEZ6Q53EL9 994 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 SLC27A3Q5K4L6 730 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 TRIM68Q6AZZ1 485 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PDZD4Q76G19 769 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 EPHX4Q8IUS5 362 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 TRIM42Q8IWZ5 723 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 CMTR2Q8IYT2 770 aaKnown RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 AHI1Q8N157 1196 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 PCYOX1LQ8NBM8 494 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 C3orf58Q8NDZ4 430 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 USP13Q92995 863 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 TEKT1Q969V4 418 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 C1orf74Q96LT6 269 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 TAAR9Q96RI9 348 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 KCTD10Q9H3F6 313 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 NSMCE4AQ9NXX6 385 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 CTNNA3Q9UI47 895 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 MTF2Q9Y483 593 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 SOS1Q07889 1333 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-213ENST00000630925 IL16Q14005 1332 aa5.52□□□□□ -1.53
SDCBP-213ENST00000630925 F8W031 263 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 H7C0S8 307 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms