RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZBTB21Q9ULJ3 1066 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 PRR12Q9ULL5 1215 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 PCDHA12Q9UN75 941 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 R3HCC1Q9Y3T6 440 aaKnown RBP6.25□□□□□ -1.41
NEK3-211ENST00000629912 SMCHD1A6NHR9 2005 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 SYNRGQ9UMZ2 1314 aa6.25□□□□□ -1.41
NEK3-211ENST00000629912 PHF20L1A8MW92 1017 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L15C9J2P7 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L13C9JLJ4 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L11C9JVI0 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L18D6R9N7 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L22D6RA61 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L17D6RBQ6 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L19D6RCP7 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L20D6RJB6 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 KIF2AO00139 706 aaPredicted RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 NFKBIEO00221 500 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 CCP110O43303 1012 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 MARCH6O60337 910 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 CCNE1P24864 410 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 HOXD11P31277 338 aaPredicted RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 SREBF1P36956 1147 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 ECE1P42892 770 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 STAT2P52630 851 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 STX17P56962 302 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 ARHGAP4P98171 946 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 C1QBPQ07021 282 aaKnown RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L24Q0WX57 530 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 TNFAIP1Q13829 316 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 RASA3Q14644 834 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 TPD52L1Q16890 204 aaPredicted RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 NBPF9Q3BBW0 867 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 KIAA1755Q5JYT7 1200 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 DNTTIP2Q5QJE6 756 aaKnown RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 KLHL10Q6JEL2 608 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 USP17L6PQ6QN14 398 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 UNC13DQ70J99 1090 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 FCHSD1Q86WN1 690 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 TRMT44Q8IYL2 757 aaKnown RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 CCAR2Q8N163 923 aaKnown RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 C17orf53Q8N3J3 647 aaPredicted RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 SAMD3Q8N6K7 520 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 RASSF8Q8NHQ8 419 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 NELFBQ8WX92 580 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 RAD54LQ92698 747 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 TEPSINQ96N21 525 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 PLIN2Q99541 437 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 NUP88Q99567 741 aaPredicted RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 P2RX7Q99572 595 aaKnown RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 ANO3Q9BYT9 981 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 TMEM39BQ9GZU3 492 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 NT5C3AQ9H0P0 336 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 RANBP17Q9H2T7 1088 aaKnown RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 THAP9Q9H5L6 903 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 VEZTQ9HBM0 779 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 MRPL11Q9Y3B7 192 aaKnown RBP6.24□□□□□ -1.41
NEK3-211ENST00000629912 PAXBP1Q9Y5B6 917 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 ITIH6Q6UXX5 1313 aa6.24□□□□□ -1.41
NEK3-211ENST00000629912 BICDL2A1A5D9 508 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 MYMKA6NI61 221 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 SPDYE3A6NKU9 549 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 PSMA7O14818 248 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 OPLAHO14841 1288 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 TEX33O43247 280 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 RAD21O60216 631 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 STX10O60499 249 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 CTNND1O60716 968 aaKnown RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 EEF1GP26641 437 aaKnown RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 GTF2F1P35269 517 aaKnown RBP eCLIP6.23□□□□□ -1.41
NEK3-211ENST00000629912 PTGER2P43116 358 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 COPB1P53618 953 aaKnown RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 GHRHRQ02643 423 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 EHHADHQ08426 723 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 PDE4DQ08499 809 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 IKQ13123 557 aaPredicted RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 MCM6Q14566 821 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 KRT31Q15323 416 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 TCP11X2Q5H9J9 407 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 FAM83BQ5T0W9 1011 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 CENPPQ6IPU0 288 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 TTI2Q6NXR4 508 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 NYAP1Q6ZVC0 841 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 MIGA2Q7L4E1 593 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 IRF2BP1Q8IU81 584 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 TMEM139Q8IV31 216 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 SMYD4Q8IYR2 804 aaPredicted RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 TC2NQ8N9U0 490 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 ANKRD20A12PQ8NF67 263 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 MYRIPQ8NFW9 859 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 ETNPPLQ8TBG4 499 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 SNX29Q8TEQ0 813 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 LARP4BQ92615 738 aaKnown RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 P2RX5Q93086 422 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 CCDC51Q96ER9 411 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 CDK5RAP3Q96JB5 506 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 PANX2Q96RD6 677 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 DUSP9Q99956 384 aaKnown RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 NUDT12Q9BQG2 462 aa6.23□□□□□ -1.41
NEK3-211ENST00000629912 BMP2KQ9NSY1 1161 aaPredicted RBP6.23□□□□□ -1.41
NEK3-211ENST00000629912 MAP3K20Q9NYL2 800 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms