RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 MYLK4Q86YV6 388 aaPredicted RBP12.8□□□□□ -0.36
SHPRH-211ENST00000629427 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 LEMD3Q9Y2U8 911 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 ADCY9O60503 1353 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 MGEA5O60502 916 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 RXRBP28702 533 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 OAS2P29728 719 aaKnown RBP12.8□□□□□ -0.36
SHPRH-211ENST00000629427 LONP1P36776 959 aaKnown RBP12.8□□□□□ -0.36
SHPRH-211ENST00000629427 PHKA1P46020 1223 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 ATP6V0A1Q93050 837 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 ATP6V1E2Q96A05 226 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 RAB44Q7Z6P3 723 aaPredicted RBP12.8□□□□□ -0.36
SHPRH-211ENST00000629427 MAP7D3Q8IWC1 876 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 ZNF653Q96CK0 615 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 PCCAP05165 728 aaPredicted RBP12.8□□□□□ -0.36
SHPRH-211ENST00000629427 INHBAP08476 426 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 CLNS1AP54105 237 aaKnown RBP12.8□□□□□ -0.36
SHPRH-211ENST00000629427 USP14P54578 494 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 COG7P83436 770 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 KRT33BQ14525 404 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 CCNYQ8ND76 341 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 SDCCAG3Q96C92 435 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 BTBD18B2RXH4 712 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
SHPRH-211ENST00000629427 MARK3P27448 753 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 MUM1Q2TAK8 710 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 GCNAQ96QF7 691 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 CLIC4Q9Y696 253 aa12.8□□□□□ -0.36
SHPRH-211ENST00000629427 SEMA3EO15041 775 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 FOSP01100 380 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 TFAMQ00059 246 aaKnown RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 CCDC38Q502W7 563 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 TTC1Q99614 292 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 FNDC3AQ9Y2H6 1198 aaKnown RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 GDF11O95390 407 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 GPATCH4Q5T3I0 446 aaKnown RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 MCUQ8NE86 351 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 HOMER3Q9NSC5 361 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 ABCF3Q9NUQ8 709 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 GTPBP6O43824 516 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 NDUFA8P51970 172 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 ZNF827Q17R98 1081 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 FAM26FQ5R3K3 315 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 NT5C1BQ96P26 610 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 JPH2Q9BR39 696 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 BAIAP2L1Q9UHR4 511 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 SLC16A2P36021 539 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 ZBTB33Q86T24 672 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 TTC30AQ86WT1 665 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 CPSF2Q9P2I0 782 aaKnown RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 ARHGEF12Q9NZN5 1544 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 YWHAGP61981 247 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 PSPC1Q8WXF1 523 aaKnown RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 TSC1Q92574 1164 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 RPGRIP1Q96KN7 1286 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 TACO1Q9BSH4 297 aaKnown RBP12.79□□□□□ -0.36
SHPRH-211ENST00000629427 UBN2Q6ZU65 1347 aa12.79□□□□□ -0.36
SHPRH-211ENST00000629427 MYO1FO00160 1098 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 BPIFB4P59827 614 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 RASSF7Q02833 373 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 CNOT6LQ96LI5 555 aaKnown RBP12.78□□□□□ -0.36
SHPRH-211ENST00000629427 LRGUKQ96M69 825 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 TM6SF1Q9BZW5 370 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 USH1CQ9Y6N9 552 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 PDE8BO95263 885 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 PSMC2P35998 433 aaKnown RBP12.78□□□□□ -0.36
SHPRH-211ENST00000629427 ATP1A2P50993 1020 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 OSTNP61366 133 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 PCIF1Q9H4Z3 704 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 ZNF215Q9UL58 517 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-211ENST00000629427 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 ADAMTS12P58397 1594 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 OPHN1O60890 802 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 DNAAF3Q8N9W5 541 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 MICAL1Q8TDZ2 1067 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 GANCQ8TET4 914 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 CEP170P1Q96L14 293 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 ATP10DQ9P241 1426 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 LRRN2O75325 713 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 TTC30BQ8N4P2 665 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 SPDL1Q96EA4 605 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 USP28Q96RU2 1077 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 MAPK4P31152 587 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 SERPINB6P35237 376 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 SNX1Q13596 522 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 PDE1BQ01064 536 aa12.78□□□□□ -0.36
SHPRH-211ENST00000629427 PASKQ96RG2 1323 aa12.77□□□□□ -0.36
SHPRH-211ENST00000629427 ZNF233A6NK53 670 aa12.77□□□□□ -0.36
SHPRH-211ENST00000629427 SERPINB2P05120 415 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms