RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 CCDC148Q8NFR7 591 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 SYTL5Q8TDW5 730 aaPredicted RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 NSUN6Q8TEA1 469 aaKnown RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.26□□□□□ -0.93
CHD2-213ENST00000628118 RNF208Q9H0X6 261 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 PAK6Q9NQU5 681 aaPredicted RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 SH3GLB2Q9NR46 395 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 FLRT1Q9NZU1 646 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 TPCN1Q9ULQ1 816 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 V9GY48 417 aaPredicted RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 RBBP6Q7Z6E9 1792 aaKnown RBP9.26□□□□□ -0.93
CHD2-213ENST00000628118 STK36Q9NRP7 1315 aa9.26□□□□□ -0.93
CHD2-213ENST00000628118 KIAA0100Q14667 2235 aaKnown RBP9.25□□□□□ -0.93
CHD2-213ENST00000628118 ESYT2A0FGR8 921 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 SOWAHBA6NEL2 793 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 CCDC85CA6NKD9 419 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 SEPT4O43236 478 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 DEXIO95424 95 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 CFBP00751 764 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 CYBAP13498 195 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 SCG2P13521 617 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 EDNRBP24530 442 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 GNA11P29992 359 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 GJA8P48165 433 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 SCRN1Q12765 414 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 SLC30A10Q6XR72 485 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 ARMCX2Q7L311 632 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 HEATR3Q7Z4Q2 680 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 CMTR1Q8N1G2 835 aaKnown RBP9.25□□□□□ -0.93
CHD2-213ENST00000628118 CCDC82Q8N4S0 544 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 WASF1Q92558 559 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 GTF3C6Q969F1 213 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 FGD4Q96M96 766 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 PSTPIP2Q9H939 334 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 EHMT1Q9H9B1 1298 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 VTA1Q9NP79 307 aa9.25□□□□□ -0.93
CHD2-213ENST00000628118 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.25□□□□□ -0.93
CHD2-213ENST00000628118 OPLAHO14841 1288 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 STAM2O75886 525 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 SGPL1O95470 568 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 SNAI1O95863 264 aaPredicted RBP9.24□□□□□ -0.93
CHD2-213ENST00000628118 FOSP01100 380 aaPredicted RBP9.24□□□□□ -0.93
CHD2-213ENST00000628118 AKR1A1P14550 325 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 XBP1P17861 261 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 CYP2C19P33261 490 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 NAPAP54920 295 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 CNTN2Q02246 1040 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 AP3B2Q13367 1082 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 ACVR2BQ13705 512 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 MTFR1Q15390 333 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 ME3Q16798 604 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 ARHGEF16Q5VV41 709 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 GALNT17Q6IS24 598 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 XRRA1Q6P2D8 792 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 ANKLE1Q8NAG6 615 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 SMARCC2Q8TAQ2 1214 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 BICD2Q8TD16 824 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 PIBF1Q8WXW3 757 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 RMDN3Q96TC7 470 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 LLPHQ9BRT6 129 aaKnown RBP9.24□□□□□ -0.93
CHD2-213ENST00000628118 SLC26A6Q9BXS9 759 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 CRISPLD2Q9H0B8 497 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 UNC93B1Q9H1C4 597 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 C6orf50Q9HD87 102 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 RIC8AQ9NPQ8 531 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 DDX20Q9UHI6 824 aaKnown RBP9.24□□□□□ -0.93
CHD2-213ENST00000628118 FAM184BQ9ULE4 1060 aa9.24□□□□□ -0.93
CHD2-213ENST00000628118 STXBP3O00186 592 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 STK25O00506 426 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 NKRFO15226 690 aaKnown RBP eCLIP9.23□□□□□ -0.93
CHD2-213ENST00000628118 ZNF865P0CJ78 1059 aaPredicted RBP9.23□□□□□ -0.93
CHD2-213ENST00000628118 TAL1P17542 331 aaPredicted RBP9.23□□□□□ -0.93
CHD2-213ENST00000628118 ADCY7P51828 1080 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 PDE4DQ08499 809 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 TRIM32Q13049 653 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 STK3Q13188 491 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 STXBP2Q15833 593 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 PKN1Q16512 942 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 IQSEC1Q6DN90 963 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 KCNV1Q6PIU1 500 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 U2AF1L4Q8WU68 220 aaKnown RBP9.23□□□□□ -0.93
CHD2-213ENST00000628118 TBC1D5Q92609 795 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 PHKBQ93100 1093 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 TAAR1Q96RJ0 339 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 ZMYND12Q9H0C1 365 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 NCOA5Q9HCD5 579 aaKnown RBP9.23□□□□□ -0.93
CHD2-213ENST00000628118 PXMP2Q9NR77 195 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 Q9Y3F1 56 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 FRMPD4Q14CM0 1322 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 LCTP09848 1927 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 MCM3APO60318 1980 aa9.23□□□□□ -0.93
CHD2-213ENST00000628118 RBM47A0AV96 593 aaKnown RBP9.22□□□□□ -0.93
CHD2-213ENST00000628118 SMCO2A6NFE2 343 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 SPDYE3A6NKU9 549 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 MEIS2O14770 477 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 DUSP11O75319 330 aaKnown RBP9.22□□□□□ -0.93
CHD2-213ENST00000628118 EIF3JO75822 258 aaKnown RBP9.22□□□□□ -0.93
CHD2-213ENST00000628118 NR3C2P08235 984 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms