RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 ZIC5Q96T25 663 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 ANO3Q9BYT9 981 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 EHMT1Q9H9B1 1298 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 TMEM260Q9NX78 707 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 DACT1Q9NYF0 836 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 PTPRFP10586 1907 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 TESPA1A2RU30 521 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-220ENST00000625171 NEMFO60524 1076 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 NR1I2O75469 434 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 CETPP11597 493 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 MCM7P33993 719 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 COPB2P35606 906 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00963-220ENST00000625171 GTF2A2P52657 109 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 SNAP25P60880 206 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 UBE2SQ16763 222 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 ZSCAN23Q3MJ62 389 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 GPAT2Q6NUI2 795 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 CCDC174Q6PII3 467 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 CHST13Q8NET6 341 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 P2RX7Q99572 595 aaKnown RBP13.35□□□□□ -0.27
LINC00963-220ENST00000625171 CLSTN2Q9H4D0 955 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 CTDP1Q9Y5B0 961 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-220ENST00000625171 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
LINC00963-220ENST00000625171 CCNT1O60563 726 aaKnown RBP13.34□□□□□ -0.27
LINC00963-220ENST00000625171 ZNF202O95125 648 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 OR52Z1P0C646 297 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 GJA5P36382 358 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 GSE1Q14687 1217 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 LETM2Q2VYF4 491 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 KANK3Q6NY19 840 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 DTHD1Q6ZMT9 781 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 NIPA1Q7RTP0 329 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 KCTD17Q8N5Z5 321 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 WNK4Q96J92 1243 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 TRERF1Q96PN7 1200 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 GOLPH3LQ9H4A5 285 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 RAVER2Q9HCJ3 691 aaKnown RBP13.34□□□□□ -0.27
LINC00963-220ENST00000625171 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
LINC00963-220ENST00000625171 KCNMB3Q9NPA1 279 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
LINC00963-220ENST00000625171 CFBP00751 764 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 BCRP11274 1271 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 PFKFB1P16118 471 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 ATP2B1P20020 1258 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 OSBPP22059 807 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 STAT3P40763 770 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 ZNF157P51786 506 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-220ENST00000625171 NDUFA8P51970 172 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 SOX10P56693 466 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 IL17AQ16552 155 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 SPRYD7Q5W111 196 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 CTU1Q7Z7A3 348 aaKnown RBP13.33□□□□□ -0.28
LINC00963-220ENST00000625171 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 SLFN12Q8IYM2 578 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 CLIC6Q96NY7 704 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 CSRNP2Q9H175 543 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
LINC00963-220ENST00000625171 NUP62CLQ9H1M0 184 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 TMEM60Q9H2L4 133 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 KCNH3Q9ULD8 1083 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 STK24Q9Y6E0 443 aa13.33□□□□□ -0.28
LINC00963-220ENST00000625171 A0A1B0GVL5 298 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 KINO60870 393 aaKnown RBP13.32□□□□□ -0.28
LINC00963-220ENST00000625171 TRPA1O75762 1119 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 SLC25A27O95847 323 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 SLC10A3P09131 477 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 ALAS1P13196 640 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 SYKP43405 635 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 INHBEP58166 350 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 IRX3P78415 501 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-220ENST00000625171 PKN2Q16513 984 aaKnown RBP13.32□□□□□ -0.28
LINC00963-220ENST00000625171 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 LRSAM1Q6UWE0 723 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 CPXCR1Q8N123 301 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-220ENST00000625171 TBC1D5Q92609 795 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 RAB34Q9BZG1 259 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 ACAD9Q9H845 621 aa13.32□□□□□ -0.28
LINC00963-220ENST00000625171 DDX25Q9UHL0 483 aaKnown RBP13.32□□□□□ -0.28
LINC00963-220ENST00000625171 A0A0G2JMZ2 1700 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms