RNA–Protein interactions for RNA: ENST00000622991.1

PCDHB6-202, Transcript of protocadherin beta 6, humanhuman

TSL 2 BASIC

Gene PCDHB6, Length 2,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-202ENST00000622991 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 SYDE2Q5VT97 1194 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 RRAGBQ5VZM2 374 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 TXLNBQ8N3L3 684 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 TRIML1Q8N9V2 468 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 MMTAG2Q9BU76 263 aaKnown RBP18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 NFE2L3Q9Y4A8 694 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 GMPSP49915 693 aaPredicted RBP18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 MMP14P50281 582 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 GTF2A1P52655 376 aaPredicted RBP18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 STX17P56962 302 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 GSDMAQ96QA5 445 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 CCSER1Q9C0I3 900 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 TMX2Q9Y320 296 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 FHOD1Q9Y613 1164 aa18.01■□□□□ 0.47
PCDHB6-202ENST00000622991 BRCA1P38398 1863 aaKnown RBP18■□□□□ 0.47
PCDHB6-202ENST00000622991 MEIS2O14770 477 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 CALCRLQ16602 461 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 TBC1D10BQ4KMP7 808 aaPredicted RBP18■□□□□ 0.47
PCDHB6-202ENST00000622991 FAM83BQ5T0W9 1011 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 CCDC34Q96HJ3 373 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 TMX1Q9H3N1 280 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 SAMSN1Q9NSI8 373 aaKnown RBP18■□□□□ 0.47
PCDHB6-202ENST00000622991 PRR12Q9ULL5 1215 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 PLCG1P19174 1290 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 CAP2P40123 477 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 TNIP1Q15025 636 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 CABP7Q86V35 215 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 MICALL2Q8IY33 904 aa18■□□□□ 0.47
PCDHB6-202ENST00000622991 POTEMA6NI47 508 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 PPP1R3GB7ZBB8 358 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 H2AFXP16104 143 aaPredicted RBP17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 ZNF280AP59817 542 aaPredicted RBP17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 SAMD1Q6SPF0 538 aaPredicted RBP17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 IGSF22Q8N9C0 903 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 TEPSINQ96N21 525 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 USP27XA6NNY8 438 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 OPLAHO14841 1288 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 GTPBP6O43824 516 aaPredicted RBP17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 TBC1D12O60347 775 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 TPM4P67936 248 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 C10orf67Q8IYJ2 551 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 AMNQ9BXJ7 453 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 ARHGEF10LQ9HCE6 1279 aa17.99■□□□□ 0.47
PCDHB6-202ENST00000622991 PLA2G4AP47712 749 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 BTNL9Q6UXG8 535 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 NYAP1Q6ZVC0 841 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 ENOX1Q8TC92 643 aaKnown RBP17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 HAS1Q92839 578 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 MAPK8IP1Q9UQF2 711 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 SMCHD1A6NHR9 2005 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 SERPINC1P01008 464 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 FBXO28Q9NVF7 368 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 INTS13Q9NVM9 706 aa17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 CNOT7Q9UIV1 285 aaKnown RBP17.98■□□□□ 0.47
PCDHB6-202ENST00000622991 MYO1CO00159 1063 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 PNMA6AP0CW24 399 aaPredicted RBP17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 ZNF18P17022 549 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 HOXA13P31271 388 aaPredicted RBP17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 UBASH3AP57075 661 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 DGKZQ13574 1117 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 KBTBD4Q9NVX7 518 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 GDAQ9Y2T3 454 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 PHF20L1A8MW92 1017 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 RPN1P04843 607 aaKnown RBP17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 CASQ1P31415 396 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 STAT2P52630 851 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 TMC6Q7Z403 805 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 LRRC8AQ8IWT6 810 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 AK8Q96MA6 479 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 PYM1Q9BRP8 204 aaKnown RBP17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 ANO3Q9BYT9 981 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 RNF216Q9NWF9 866 aaPredicted RBP17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 ZNF541Q9H0D2 1346 aa17.97■□□□□ 0.47
PCDHB6-202ENST00000622991 LOC102724159A0A0B4J2E5 919 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 FZD9O00144 591 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 TRIM66O15016 1216 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 POLR3GO15318 223 aaPredicted RBP17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 MAP3K10Q02779 954 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 DHX8Q14562 1220 aaKnown RBP17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 PWP2Q15269 919 aaKnown RBP17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 PRAMEF18Q5VWM3 479 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 PPP4R3AQ6IN85 833 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 TBC1D5Q92609 795 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 UPF1Q92900 1129 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 CLCN6P51797 869 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 KIFC2Q96AC6 838 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 DACH1Q9UI36 760 aa17.96■□□□□ 0.47
PCDHB6-202ENST00000622991 ERCC5P28715 1186 aaPredicted RBP17.95■□□□□ 0.46
PCDHB6-202ENST00000622991 ICE2Q659A1 982 aa17.95■□□□□ 0.46
PCDHB6-202ENST00000622991 VCPKMTQ9H867 229 aa17.95■□□□□ 0.46
PCDHB6-202ENST00000622991 FZD1Q9UP38 647 aa17.95■□□□□ 0.46
PCDHB6-202ENST00000622991 KLRC4O43908 158 aa17.95■□□□□ 0.46
PCDHB6-202ENST00000622991 PSEN1P49768 467 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms