RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MICALL1Q8N3F8 863 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 GIMAP8Q8ND71 665 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-229ENST00000622668 AIFM3Q96NN9 605 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-229ENST00000622668 KCNH3Q9ULD8 1083 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 FAM184BQ9ULE4 1060 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 YDJCA8MPS7 323 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 DCDC2CA8MYV0 355 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 GCFC2P16383 781 aaKnown RBP10.12□□□□□ -0.79
HDAC9-229ENST00000622668 ARPP19P56211 112 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 CCDC183Q5T5S1 534 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 P2RX7Q99572 595 aaKnown RBP10.12□□□□□ -0.79
HDAC9-229ENST00000622668 KDM3AQ9Y4C1 1321 aa10.12□□□□□ -0.79
HDAC9-229ENST00000622668 HNRNPDLO14979 420 aaKnown RBP10.11□□□□□ -0.79
HDAC9-229ENST00000622668 CD19P15391 556 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 PPP2R5AQ15172 486 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 GRIK5Q16478 980 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 ODR4Q5SWX8 454 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 SCFD2Q8WU76 684 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 ASCC2Q9H1I8 757 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-229ENST00000622668 DDX4Q9NQI0 724 aaKnown RBP10.11□□□□□ -0.79
HDAC9-229ENST00000622668 POLIQ9UNA4 740 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 PRPF6O94906 941 aaKnown RBP10.11□□□□□ -0.79
HDAC9-229ENST00000622668 NR3C2P08235 984 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 DNA2P51530 1060 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 OSTNP61366 133 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 KIAA1328Q86T90 577 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 EXOC8Q8IYI6 725 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF710Q8N1W2 664 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-229ENST00000622668 CEP83Q9Y592 693 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 KIF20BQ96Q89 1820 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 NRXN3Q9Y4C0 1643 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 HTRA3P83110 453 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 ARHGAP4P98171 946 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 IFRD2Q12894 506 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-229ENST00000622668 TBC1D5Q92609 795 aa10.11□□□□□ -0.79
HDAC9-229ENST00000622668 RGPD8O14715 1765 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-229ENST00000622668 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
HDAC9-229ENST00000622668 TNFAIP2Q03169 654 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 FKBP1CQ5VVH2 108 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 DLK2Q6UY11 383 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 CHST13Q8NET6 341 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 FBXO18Q8NFZ0 1043 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 NAP1L5Q96NT1 182 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-229ENST00000622668 CETN3O15182 167 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 ADCY3O60266 1144 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF165P49910 485 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 AP3B2Q13367 1082 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 SPA17Q15506 151 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 SWSAP1Q6NVH7 229 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 IWS1Q96ST2 819 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 MROH8Q9H579 483 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 ASTN2O75129 1339 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-229ENST00000622668 ZBTB24O43167 697 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-229ENST00000622668 PRPF3O43395 683 aaKnown RBP10.1□□□□□ -0.79
HDAC9-229ENST00000622668 RAG1P15918 1043 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 PTPRAP18433 802 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 NECTIN1Q15223 517 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 CYFIP1Q7L576 1253 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 RGS22Q8NE09 1264 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 CCDC127Q96BQ5 260 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 NACC1Q96RE7 527 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 MMS19Q96T76 1030 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 EPB41L4AQ9HCS5 686 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-229ENST00000622668 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
HDAC9-229ENST00000622668 PCDHB13Q9Y5F0 798 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 WDR64B1ANS9 1081 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 CDC25AP30304 524 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 CYP2J2P51589 502 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 TXLNBQ8N3L3 684 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 SPATC1LQ9H0A9 340 aa10.1□□□□□ -0.79
HDAC9-229ENST00000622668 KRT5P13647 590 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 RPS6P62753 249 aaKnown RBP10.09□□□□□ -0.79
HDAC9-229ENST00000622668 PPIL2Q13356 520 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 CTTNQ14247 550 aaKnown RBP10.09□□□□□ -0.79
HDAC9-229ENST00000622668 GRM4Q14833 912 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 TKFCQ3LXA3 575 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 CNNM4Q6P4Q7 775 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 STARD7Q9NQZ5 370 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 ZNF609O15014 1411 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 PIK3C2AO00443 1686 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 BICDL2A1A5D9 508 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 H0YCG3 227 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 GH1P01241 217 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 TMEM191BP0C7N4 346 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 CTNNA2P26232 953 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 APLP1P51693 650 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 LONRF3Q496Y0 759 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 IDI2Q9BXS1 227 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 GABBR1Q9UBS5 961 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 KIAA0100Q14667 2235 aaKnown RBP10.09□□□□□ -0.79
HDAC9-229ENST00000622668 COL3A1P02461 1466 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-229ENST00000622668 PFASO15067 1338 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 IPO5O00410 1097 aaKnown RBP10.09□□□□□ -0.79
HDAC9-229ENST00000622668 CUTAO60888 179 aa10.09□□□□□ -0.79
HDAC9-229ENST00000622668 SLURP2P0DP57 97 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms