RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
SNX12-206ENST00000622259 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 H3BNC9 293 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 GOLIM4O00461 696 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 ALAS1P13196 640 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
SNX12-206ENST00000622259 CHMP4BP1P59074 171 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 SNAP25P60880 206 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 GPM6BQ13491 265 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
SNX12-206ENST00000622259 CTC1Q2NKJ3 1217 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 GDF6Q6KF10 455 aaPredicted RBP17.41■□□□□ 0.38
SNX12-206ENST00000622259 ERMP1Q7Z2K6 904 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 LRRC47Q8N1G4 583 aaKnown RBP17.41■□□□□ 0.38
SNX12-206ENST00000622259 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
SNX12-206ENST00000622259 INSL6Q9Y581 213 aa17.41■□□□□ 0.38
SNX12-206ENST00000622259 MICAL3Q7RTP6 2002 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 ZFHX4Q86UP3 3567 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 RBM47A0AV96 593 aaKnown RBP17.4■□□□□ 0.38
SNX12-206ENST00000622259 H0Y858 1186 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 STXBP3O00186 592 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 TRIM27P14373 513 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 HTRA4P83105 476 aaPredicted RBP17.4■□□□□ 0.38
SNX12-206ENST00000622259 ZXDAP98168 799 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 PKN1Q16512 942 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 TRAF7Q6Q0C0 670 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 AACSQ86V21 672 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 POP1Q99575 1024 aaKnown RBP17.4■□□□□ 0.38
SNX12-206ENST00000622259 TLR9Q9NR96 1032 aa17.4■□□□□ 0.38
SNX12-206ENST00000622259 TMEM232C9JQI7 657 aa17.39■□□□□ 0.37
SNX12-206ENST00000622259 CKBP12277 381 aa17.39■□□□□ 0.37
SNX12-206ENST00000622259 ADD2P35612 726 aa17.39■□□□□ 0.37
SNX12-206ENST00000622259 RBL2Q08999 1139 aa17.39■□□□□ 0.37
SNX12-206ENST00000622259 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
SNX12-206ENST00000622259 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
SNX12-206ENST00000622259 CHMP4CQ96CF2 233 aa17.39■□□□□ 0.37
SNX12-206ENST00000622259 DNAJC2Q99543 621 aaKnown RBP17.39■□□□□ 0.37
SNX12-206ENST00000622259 GVINP1Q7Z2Y8 2422 aa17.39■□□□□ 0.37
SNX12-206ENST00000622259 A6NJR5 290 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 BMP3P12645 472 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 GTF2F1P35269 517 aaKnown RBP eCLIP17.38■□□□□ 0.374e-7■■■■□ 22
SNX12-206ENST00000622259 HYAL1Q12794 435 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 IKBKEQ14164 716 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 TKFCQ3LXA3 575 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 NSMFQ6X4W1 530 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 AMOTL1Q8IY63 956 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 CCDC155Q8N6L0 562 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 WNT8BQ93098 351 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 MKL1Q969V6 931 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
SNX12-206ENST00000622259 PROB1E7EW31 1015 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 TBX10O75333 385 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
SNX12-206ENST00000622259 AVPR2P30518 371 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 ALDH5A1P51649 535 aaPredicted RBP17.37■□□□□ 0.37
SNX12-206ENST00000622259 SMAD4Q13485 552 aaKnown RBP17.37■□□□□ 0.37
SNX12-206ENST00000622259 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 MYOCDQ8IZQ8 938 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 CEP95Q96GE4 821 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 SLC4A4Q9Y6R1 1079 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 NLRC5Q86WI3 1866 aa17.37■□□□□ 0.37
SNX12-206ENST00000622259 PRR23AA6NEV1 266 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 LINC01565O15544 149 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 EFCAB14O75071 495 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 LGR5O75473 907 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 KRT37O76014 449 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 ID4P47928 161 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
SNX12-206ENST00000622259 TMEM192Q8IY95 271 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 ASIC4Q96FT7 647 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 TRPC6Q9Y210 931 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 EPG5Q9HCE0 2579 aa17.36■□□□□ 0.37
SNX12-206ENST00000622259 FDX1P10109 184 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 STAT2P52630 851 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 BAATQ14032 418 aaPredicted RBP17.35■□□□□ 0.37
SNX12-206ENST00000622259 SESTD1Q86VW0 696 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 FBXO11Q86XK2 927 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 KAT2BQ92831 832 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 SAMD11Q96NU1 681 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 IL1RAPL2Q9NP60 686 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 MTMR4Q9NYA4 1195 aa17.35■□□□□ 0.37
SNX12-206ENST00000622259 KPNA6O60684 536 aa17.34■□□□□ 0.37
SNX12-206ENST00000622259 ARIH2O95376 493 aa17.34■□□□□ 0.37
SNX12-206ENST00000622259 PARNO95453 639 aaKnown RBP17.34■□□□□ 0.37
SNX12-206ENST00000622259 PPP2R5BQ15173 497 aa17.34■□□□□ 0.37
SNX12-206ENST00000622259 TRIM71Q2Q1W2 868 aaKnown RBP17.34■□□□□ 0.37
SNX12-206ENST00000622259 BRDTQ58F21 947 aaPredicted RBP17.34■□□□□ 0.37
SNX12-206ENST00000622259 ZNF618Q5T7W0 954 aa17.34■□□□□ 0.37
SNX12-206ENST00000622259 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
SNX12-206ENST00000622259 MKNK2Q9HBH9 465 aa17.34■□□□□ 0.37
SNX12-206ENST00000622259 ISY1Q9ULR0 285 aaKnown RBP17.34■□□□□ 0.37
SNX12-206ENST00000622259 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
SNX12-206ENST00000622259 CACNA1GO43497 2377 aa17.33■□□□□ 0.37
SNX12-206ENST00000622259 RAD50Q92878 1312 aa17.33■□□□□ 0.36
SNX12-206ENST00000622259 LOC730098B7Z3J9 87 aa17.33■□□□□ 0.36
SNX12-206ENST00000622259 PRDM1O75626 825 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms