RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	ATG2A	Q2TAZ0	1938 aa		5.2	□□□□□ -1.58
LINC00649-219	ENST00000622171	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.2	□□□□□ -1.58
LINC00649-219	ENST00000622171	GRIN2D	O15399	1336 aa		5.2	□□□□□ -1.58
LINC00649-219	ENST00000622171	NLRC5	Q86WI3	1866 aa		5.2	□□□□□ -1.58
LINC00649-219	ENST00000622171	KIAA1671	Q9BY89	1806 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	ERICH2	A1L162	156 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	ASB14	A6NK59	587 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	SH2B2	O14492	632 aa	Predicted RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	ADAMTS3	O15072	1205 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	DUSP11	O75319	330 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	CSF2RA	P15509	400 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	RAG1	P15918	1043 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	PBX2	P40425	430 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	FAAP100	Q0VG06	881 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	PPP2R5B	Q15173	497 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	TKFC	Q3LXA3	575 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	ASPRV1	Q53RT3	343 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	GPATCH4	Q5T3I0	446 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	ARHGEF16	Q5VV41	709 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	USP17L6P	Q6QN14	398 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	CASC1	Q6TDU7	716 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	TMCO2	Q7Z6W1	182 aa	Predicted RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	DEFB128	Q7Z7B8	93 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	DGKH	Q86XP1	1220 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	TRIM50	Q86XT4	487 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	DEFB123	Q8N688	67 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	KLHDC9	Q8NEP7	349 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	NCOA7	Q8NI08	942 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	AFG1L	Q8WV93	481 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	RNPC3	Q96LT9	517 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	GLT1D1	Q96MS3	346 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	RMDN3	Q96TC7	470 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	ALG1	Q9BT22	464 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	AP5M1	Q9H0R1	490 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	UPF3A	Q9H1J1	476 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	ABHD16B	Q9H3Z7	469 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	CNNM2	Q9H8M5	875 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	GNE	Q9Y223	722 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	DIS3	Q9Y2L1	958 aa	Known RBP	5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171	PCDHA1	Q9Y5I3	950 aa		5.19	□□□□□ -1.58
LINC00649-219	ENST00000622171		A0A0U1RQG5	324 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	CCDC69	A6NI79	296 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	ZBBX	A8MT70	800 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	DCDC2C	A8MYV0	355 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	B4GALT4	O60513	344 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	CDC45	O75419	566 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	CSPG5	O95196	566 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	NEFL	P07196	543 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	TXN	P10599	105 aa	Known RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	MYOG	P15173	224 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	IBSP	P21815	317 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	FOSB	P53539	338 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	RABGGTB	P53611	331 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	GJA9	P57773	515 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	ZNF200	P98182	395 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	FPGS	Q05932	587 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	APOBR	Q0VD83	1088 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	ITGA7	Q13683	1181 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	SNX17	Q15036	470 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	PPP4R3B	Q5MIZ7	849 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	HEATR3	Q7Z4Q2	680 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	SPRED2	Q7Z698	418 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	CATIP	Q7Z7H3	387 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	ZNF467	Q7Z7K2	595 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	SRBD1	Q8N5C6	995 aa	Known RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	IGDCC4	Q8TDY8	1250 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	PPM1E	Q8WY54	764 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	MAP4K1	Q92918	833 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	ZBTB10	Q96DT7	871 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	JAKMIP1	Q96N16	626 aa	Known RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	TTC14	Q96N46	770 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	WNT8A	Q9H1J5	351 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	SPC25	Q9HBM1	224 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	VTA1	Q9NP79	307 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	PXMP2	Q9NR77	195 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	RTEL1	Q9NZ71	1219 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	CXXC1	Q9P0U4	656 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	BRPF3	Q9ULD4	1205 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	SYNPO2	Q9UMS6	1093 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	WDR19	Q8NEZ3	1342 aa		5.18	□□□□□ -1.58
LINC00649-219	ENST00000622171	KLF18	A0A0U1RQI7	1052 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	PALM3	A6NDB9	673 aa	Predicted RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	GOLGA8A	A7E2F4	631 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	GOLGA8B	A8MQT2	603 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	ARVCF	O00192	962 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	ZBTB5	O15062	677 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	PLA2G6	O60733	806 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	RGS20	O76081	388 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	GGPS1	O95749	300 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	CTSH	P09668	335 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	PC	P11498	1178 aa	Known RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	PURA	Q00577	322 aa	Known RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	SP2	Q02086	613 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	ARHGAP1	Q07960	439 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	TROAP	Q12815	778 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	STK3	Q13188	491 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	HIC1	Q14526	733 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	SART3	Q15020	963 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms