RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 RMDN3Q96TC7 470 aa27.95■■■□□ 2.06
ATXN3-253ENST00000621269 MTG1Q9BT17 334 aaPredicted RBP27.95■■■□□ 2.06
ATXN3-253ENST00000621269 MAD2L2Q9UI95 211 aa27.95■■■□□ 2.06
ATXN3-253ENST00000621269 B4GALT4O60513 344 aa27.94■■■□□ 2.06
ATXN3-253ENST00000621269 KPNA6O60684 536 aa27.94■■■□□ 2.06
ATXN3-253ENST00000621269 TMEM240Q5SV17 173 aa27.94■■■□□ 2.06
ATXN3-253ENST00000621269 PSRC1Q6PGN9 363 aaPredicted RBP27.94■■■□□ 2.06
ATXN3-253ENST00000621269 C16orf59Q7L2K0 433 aa27.94■■■□□ 2.06
ATXN3-253ENST00000621269 IWS1Q96ST2 819 aa27.94■■■□□ 2.06
ATXN3-253ENST00000621269 ALDH8A1Q9H2A2 487 aaPredicted RBP27.94■■■□□ 2.06
ATXN3-253ENST00000621269 PALM3A6NDB9 673 aaPredicted RBP27.93■■■□□ 2.06
ATXN3-253ENST00000621269 E7EWF7 191 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 ZBTB5O15062 677 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 CFBP00751 764 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 ACRP10323 421 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 STXBP2Q15833 593 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 ARHGEF16Q5VV41 709 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 COPS5Q92905 334 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 IL23AQ9NPF7 189 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 COL20A1Q9P218 1284 aa27.93■■■□□ 2.06
ATXN3-253ENST00000621269 SUPT20HL2P0C7V6 817 aa27.92■■■□□ 2.06
ATXN3-253ENST00000621269 WTAPQ15007 396 aa27.92■■■□□ 2.06
ATXN3-253ENST00000621269 SEPT14Q6ZU15 432 aa27.92■■■□□ 2.06
ATXN3-253ENST00000621269 CDX2Q99626 313 aaPredicted RBP27.92■■■□□ 2.06
ATXN3-253ENST00000621269 A6NJR5 290 aa27.91■■■□□ 2.06
ATXN3-253ENST00000621269 TRAF1Q13077 416 aa27.91■■■□□ 2.06
ATXN3-253ENST00000621269 GRM4Q14833 912 aa27.91■■■□□ 2.06
ATXN3-253ENST00000621269 ZNF365Q70YC5 407 aa27.91■■■□□ 2.06
ATXN3-253ENST00000621269 MAP4K1Q92918 833 aa27.91■■■□□ 2.06
ATXN3-253ENST00000621269 MTMR8Q96EF0 704 aa27.91■■■□□ 2.06
ATXN3-253ENST00000621269 NOC4LQ9BVI4 516 aaKnown RBP27.91■■■□□ 2.06
ATXN3-253ENST00000621269 TTYH1Q9H313 450 aaPredicted RBP27.91■■■□□ 2.06
ATXN3-253ENST00000621269 PCDHA1Q9Y5I3 950 aa27.91■■■□□ 2.06
ATXN3-253ENST00000621269 TMEM265A0A087WTH1 108 aa27.9■■■□□ 2.06
ATXN3-253ENST00000621269 ARIH2O95376 493 aa27.9■■■□□ 2.06
ATXN3-253ENST00000621269 CCL23P55773 120 aa27.9■■■□□ 2.06
ATXN3-253ENST00000621269 FAM47CQ5HY64 1035 aa27.9■■■□□ 2.06
ATXN3-253ENST00000621269 CHST3Q7LGC8 479 aa27.9■■■□□ 2.06
ATXN3-253ENST00000621269 TAF6LQ9Y6J9 622 aa27.9■■■□□ 2.06
ATXN3-253ENST00000621269 UMODL1Q5DID0 1318 aa27.9■■■□□ 2.06
ATXN3-253ENST00000621269 FGBP02675 491 aa27.89■■■□□ 2.06
ATXN3-253ENST00000621269 EIF2AK2P19525 551 aaKnown RBP27.89■■■□□ 2.06
ATXN3-253ENST00000621269 HSD17B4P51659 736 aa27.89■■■□□ 2.06
ATXN3-253ENST00000621269 NBPF20Q3BBV1 942 aa27.89■■■□□ 2.06
ATXN3-253ENST00000621269 TMEM67Q5HYA8 995 aa27.89■■■□□ 2.06
ATXN3-253ENST00000621269 CCDC62Q6P9F0 684 aa27.89■■■□□ 2.06
ATXN3-253ENST00000621269 HOMER1Q86YM7 354 aa27.89■■■□□ 2.06
ATXN3-253ENST00000621269 MTIF3Q9H2K0 278 aaKnown RBP27.89■■■□□ 2.06
ATXN3-253ENST00000621269 TRMT13Q9NUP7 481 aaKnown RBP27.89■■■□□ 2.06
ATXN3-253ENST00000621269 MAP3K20Q9NYL2 800 aaKnown RBP27.89■■■□□ 2.06
ATXN3-253ENST00000621269 RBM8AQ9Y5S9 174 aaKnown RBP27.89■■■□□ 2.06
ATXN3-253ENST00000621269 PPP1R11O60927 126 aaPredicted RBP27.88■■■□□ 2.05
ATXN3-253ENST00000621269 EIF3JO75822 258 aaKnown RBP27.88■■■□□ 2.05
ATXN3-253ENST00000621269 GH1P01241 217 aa27.88■■■□□ 2.05
ATXN3-253ENST00000621269 DNAJB2P25686 324 aa27.88■■■□□ 2.05
ATXN3-253ENST00000621269 LY6KQ17RY6 165 aa27.88■■■□□ 2.05
ATXN3-253ENST00000621269 STOX1Q6ZVD7 989 aa27.88■■■□□ 2.05
ATXN3-253ENST00000621269 CATIPQ7Z7H3 387 aa27.88■■■□□ 2.05
ATXN3-253ENST00000621269 SENP2Q9HC62 589 aa27.88■■■□□ 2.05
ATXN3-253ENST00000621269 PXMP2Q9NR77 195 aa27.88■■■□□ 2.05
ATXN3-253ENST00000621269 NR3C2P08235 984 aa27.87■■■□□ 2.05
ATXN3-253ENST00000621269 RASIP1Q5U651 963 aa27.87■■■□□ 2.05
ATXN3-253ENST00000621269 NFRKBQ6P4R8 1299 aa27.87■■■□□ 2.05
ATXN3-253ENST00000621269 RPUSD2Q8IZ73 545 aaKnown RBP27.87■■■□□ 2.05
ATXN3-253ENST00000621269 SAMD3Q8N6K7 520 aa27.87■■■□□ 2.05
ATXN3-253ENST00000621269 PIGSQ96S52 555 aa27.87■■■□□ 2.05
ATXN3-253ENST00000621269 RIOX1Q9H6W3 641 aa27.87■■■□□ 2.05
ATXN3-253ENST00000621269 OPLAHO14841 1288 aa27.86■■■□□ 2.05
ATXN3-253ENST00000621269 TROAPQ12815 778 aa27.86■■■□□ 2.05
ATXN3-253ENST00000621269 AFG1LQ8WV93 481 aa27.86■■■□□ 2.05
ATXN3-253ENST00000621269 MYLIPQ8WY64 445 aa27.86■■■□□ 2.05
ATXN3-253ENST00000621269 HERVK_113Q902F9 699 aa27.86■■■□□ 2.05
ATXN3-253ENST00000621269 WNT8AQ9H1J5 351 aa27.86■■■□□ 2.05
ATXN3-253ENST00000621269 CYP2C9P11712 490 aa27.85■■■□□ 2.05
ATXN3-253ENST00000621269 CHMP4BP1P59074 171 aa27.85■■■□□ 2.05
ATXN3-253ENST00000621269 GHRHRQ02643 423 aa27.85■■■□□ 2.05
ATXN3-253ENST00000621269 PTPN11Q06124 597 aaPredicted RBP27.85■■■□□ 2.05
ATXN3-253ENST00000621269 PNMA6FA0A0J9YX94 578 aa27.84■■■□□ 2.05
ATXN3-253ENST00000621269 HOXA13P31271 388 aaPredicted RBP27.84■■■□□ 2.05
ATXN3-253ENST00000621269 ARHGAP1Q07960 439 aa27.84■■■□□ 2.05
ATXN3-253ENST00000621269 MB21D2Q8IYB1 491 aaPredicted RBP27.84■■■□□ 2.05
ATXN3-253ENST00000621269 IGDCC4Q8TDY8 1250 aa27.84■■■□□ 2.05
ATXN3-253ENST00000621269 TIFAQ96CG3 184 aa27.84■■■□□ 2.05
ATXN3-253ENST00000621269 DDX41Q9UJV9 622 aaKnown RBP27.84■■■□□ 2.05
ATXN3-253ENST00000621269 MRVI1Q9Y6F6 885 aa27.84■■■□□ 2.05
ATXN3-253ENST00000621269 MYH6P13533 1939 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 GRXCR1A8MXD5 290 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 GCOM1H8Y6P7 765 aaPredicted RBP27.83■■■□□ 2.05
ATXN3-253ENST00000621269 DLL1O00548 723 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 MMP3P08254 477 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 POLR2MP0CAP2 368 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 MYCLP12524 364 aaPredicted RBP27.83■■■□□ 2.05
ATXN3-253ENST00000621269 CASTP20810 708 aaKnown RBP27.83■■■□□ 2.05
ATXN3-253ENST00000621269 ANTXR2P58335 489 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 SLC35G1Q2M3R5 365 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 CASC1Q6TDU7 716 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 OTOP2Q7RTS6 562 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 PPP1R13LQ8WUF5 828 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 SCLYQ96I15 445 aa27.83■■■□□ 2.05
ATXN3-253ENST00000621269 PDCD2LQ9BRP1 358 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms