RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 TROAPQ12815 778 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 LRCH2Q5VUJ6 765 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 CIAPIN1Q6FI81 312 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 TMC4Q7Z404 712 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 TMTC1Q8IUR5 882 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 LRRN4CLQ8ND94 238 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 NEK11Q8NG66 645 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 TAF4BQ92750 862 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 JAKMIP2Q96AA8 810 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 BICDL2A1A5D9 508 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 FGFR1OPO95684 399 aaKnown RBP10.05□□□□□ -0.8
GGA3-222ENST00000621217 ERCC5P28715 1186 aaPredicted RBP10.05□□□□□ -0.8
GGA3-222ENST00000621217 CLCN6P51797 869 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 NCAPHQ15003 741 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 PFKFB3Q16875 520 aaPredicted RBP10.05□□□□□ -0.8
GGA3-222ENST00000621217 CCDC121Q6ZUS5 278 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 OR8K1Q8NGG5 319 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 TUBGCP2Q9BSJ2 902 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 DDX25Q9UHL0 483 aaKnown RBP10.05□□□□□ -0.8
GGA3-222ENST00000621217 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
GGA3-222ENST00000621217 TMEM60Q9H2L4 133 aa10.05□□□□□ -0.8
GGA3-222ENST00000621217 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.05□□□□□ -0.8
GGA3-222ENST00000621217 HSF2BPO75031 334 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 HARSP12081 509 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 CLNS1AP54105 237 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 B4GALNT4Q76KP1 1039 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 PRMT6Q96LA8 375 aaPredicted RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 LZTS2Q9BRK4 669 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 ZCCHC17Q9NP64 241 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 TUBE1Q9UJT0 475 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 F5H6K3 240 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 BUB1O43683 1085 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 BMP3P12645 472 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 CD44P16070 742 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 KLRC3Q07444 240 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 PABPC4Q13310 644 aaKnown RBP eCLIP10.04□□□□□ -0.85e-10■■■■■ 57.7
GGA3-222ENST00000621217 SAMD7Q7Z3H4 446 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 SMCR8Q8TEV9 937 aaPredicted RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 CNOT6LQ96LI5 555 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 PHF20Q9BVI0 1012 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 ZNF341Q9BYN7 854 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 TMEM39BQ9GZU3 492 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 TACC3Q9Y6A5 838 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 EPN1Q9Y6I3 576 aaPredicted RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 MRC1P22897 1456 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 WNT7AO00755 349 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 ATP2C2O75185 946 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 FAM13AO94988 1023 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 CXCR5P32302 372 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 LONP1P36776 959 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 KRT83P78385 493 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 CDC37Q16543 378 aaPredicted RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 FAM83BQ5T0W9 1011 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 CNNM4Q6P4Q7 775 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 FAM76AQ8TAV0 307 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 GOLGA5Q8TBA6 731 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 IFT81Q8WYA0 676 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 EHMT1Q9H9B1 1298 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 DISC1Q9NRI5 854 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 BCCIPQ9P287 314 aaKnown RBP eCLIP10.04□□□□□ -0.8
GGA3-222ENST00000621217 KIAA1024Q9UPX6 916 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 SRGAP2O75044 1071 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 FCER1AP12319 257 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 CKAP4Q07065 602 aaKnown RBP10.04□□□□□ -0.8
GGA3-222ENST00000621217 EEPD1Q7L9B9 569 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 RGS22Q8NE09 1264 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 CCDC17Q96LX7 622 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 ALS2CR12Q96Q35 445 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 GINS2Q9Y248 185 aa10.04□□□□□ -0.8
GGA3-222ENST00000621217 A0A087X0B3 334 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 PSMD14O00487 310 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
GGA3-222ENST00000621217 RPAINQ86UA6 219 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 ZFPM1Q8IX07 1006 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 AFAP1L1Q8TED9 768 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 BICD1Q96G01 975 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 SH2D3AQ9BRG2 576 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 AMNQ9BXJ7 453 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.03□□□□□ -0.8
GGA3-222ENST00000621217 CCPG1Q9ULG6 757 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 JRKLQ9Y4A0 524 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 TACC1O75410 805 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 TDP2O95551 362 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 FXR1P51114 621 aaKnown RBP eCLIP10.03□□□□□ -0.8
GGA3-222ENST00000621217 IFFO1Q0D2I5 559 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 TERF2Q15554 542 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
GGA3-222ENST00000621217 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
GGA3-222ENST00000621217 TFRCP02786 760 aaKnown RBP10.03□□□□□ -0.8
GGA3-222ENST00000621217 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 CHP1Q99653 195 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 TCHPQ9BT92 498 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 MRPL44Q9H9J2 332 aaKnown RBP10.03□□□□□ -0.8
GGA3-222ENST00000621217 GOPCQ9HD26 462 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 TRIM10Q9UDY6 481 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
GGA3-222ENST00000621217 PPP1R12BO60237 982 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms