RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TMEM60Q9H2L4 133 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 GOLPH3Q9H4A6 298 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 AFDNP55196 1824 aaKnown RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 SPATA31A5Q5VU36 1347 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 SPATA31A7Q8IWB4 1347 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 GSTTP1A0A1W2PQM5 241 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 OPA1O60313 960 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 MAGEA1P43355 309 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 DNM2P50570 870 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 VAV2P52735 878 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 ATP2C1P98194 919 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 ADSSL1Q8N142 457 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 EHBP1Q8NDI1 1231 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 STAG1Q8WVM7 1258 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 OSBPL9Q96SU4 736 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 RMND1Q9NWS8 449 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 SALL4Q9UJQ4 1053 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 SNX12Q9UMY4 172 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 GLI1P08151 1106 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 CLEC4GQ6UXB4 293 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 DPP8Q6V1X1 898 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-216ENST00000620854 CTNNBL1Q8WYA6 563 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-216ENST00000620854 JDP2Q8WYK2 163 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 KRT12Q99456 494 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 CXorf56Q9H5V9 222 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 SRP68Q9UHB9 627 aaKnown RBP7.69□□□□□ -1.18
NEDD9-216ENST00000620854 HDAC9Q9UKV0 1011 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 PCDHA13Q9Y5I0 950 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 MYH13Q9UKX3 1938 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 ALDH1B1P30837 517 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 PDE6BP35913 854 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 E2F5Q15329 346 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 TMEM266Q2M3C6 531 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 CEP85LQ5SZL2 805 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 BARGINQ6ZT62 677 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 HEATR3Q7Z4Q2 680 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 SCLT1Q96NL6 688 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 ALS2CR12Q96Q35 445 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 DNAJC7Q99615 494 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 GEMIN8Q9NWZ8 242 aaKnown RBP7.69□□□□□ -1.18
NEDD9-216ENST00000620854 STIM2Q9P246 746 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 HEXIM1O94992 359 aaKnown RBP7.69□□□□□ -1.18
NEDD9-216ENST00000620854 GOLGA8HP0CJ92 632 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 PLCG2P16885 1265 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 MAP2K1Q02750 393 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-216ENST00000620854 LRRC41Q15345 812 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 LETM2Q2VYF4 491 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 GBP6Q6ZN66 633 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 GIMAP7Q8NHV1 300 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 AENQ8WTP8 325 aaKnown RBP7.69□□□□□ -1.18
NEDD9-216ENST00000620854 CALML4Q96GE6 196 aa7.69□□□□□ -1.18
NEDD9-216ENST00000620854 RASSF10A6NK89 507 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 SERPINB2P05120 415 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 CYP2D6P10635 497 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 KIF11P52732 1056 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 EHHADHQ08426 723 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TROAPQ12815 778 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 VPS36Q86VN1 386 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TICAM2Q86XR7 235 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TRIM58Q8NG06 486 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 SPAG5Q96R06 1193 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 RAB34Q9BZG1 259 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 DISC1Q9NRI5 854 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 ARHGAP20Q9P2F6 1191 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 GRIN2DO15399 1336 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 GOLGA6L10A0A0M3HER8 536 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TARSL2A2RTX5 802 aaKnown RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 PRPF3O43395 683 aaKnown RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 SCG2P13521 617 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TMOD1P28289 359 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 KIF5BP33176 963 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TECP42680 631 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 ZBED6P86452 979 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 HDLBPQ00341 1268 aaKnown RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 SEC23AQ15436 765 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 ALX1Q15699 326 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 NPY5RQ15761 445 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 DDX42Q86XP3 938 aaKnown RBP eCLIP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 STAG2Q8N3U4 1231 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 VGLL2Q8N8G2 317 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 WDR66Q8TBY9 1149 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 ZNF507Q8TCN5 953 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 MCM9Q9NXL9 1143 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 TBC1D7Q9P0N9 293 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 FAM205AQ6ZU69 1335 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 PPP1R12BO60237 982 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 LSP1P33241 339 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 PICALMQ13492 652 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 NAALADL2Q58DX5 795 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 SUSD4Q5VX71 490 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 RPGRIP1Q96KN7 1286 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 MYO5AQ9Y4I1 1855 aaKnown RBP7.68□□□□□ -1.18
NEDD9-216ENST00000620854 C5P01031 1676 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 LRRC53A6NM62 1247 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 GOLGA8KD6RF30 607 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 BMP15O95972 392 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 SLC1A4P43007 532 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 CHRNDQ07001 517 aa7.68□□□□□ -1.18
NEDD9-216ENST00000620854 NKX1-1Q15270 411 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms