RNA–Protein interactions for RNA: ENST00000619922.1

PRAMEF11-201, Transcript of PRAME family member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF11, Length 1,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11-201ENST00000619922 CCDC84Q86UT8 332 aaPredicted RBP12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 CHURC1Q8WUH1 139 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 AK8Q96MA6 479 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 CCSER1Q9C0I3 900 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 DACH1Q9UI36 760 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L15C9J2P7 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L13C9JLJ4 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L11C9JVI0 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L18D6R9N7 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L22D6RA61 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L17D6RBQ6 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L19D6RCP7 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L20D6RJB6 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L24Q0WX57 530 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 TRAF1Q13077 416 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 MORC3Q14149 939 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 KARSQ15046 597 aaKnown RBP12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 RRAGBQ5VZM2 374 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 MCTP2Q6DN12 878 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 PPP4R3AQ6IN85 833 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 NYAP1Q6ZVC0 841 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 APOBEC3FQ8IUX4 373 aaKnown RBP12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 GLIS2Q9BZE0 524 aaPredicted RBP12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 DISC1Q9NRI5 854 aa12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 DDX41Q9UJV9 622 aaKnown RBP12.9□□□□□ -0.34
PRAMEF11-201ENST00000619922 IKBKBO14920 756 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 SLC37A4O43826 429 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 EDIL3O43854 480 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 TECP42680 631 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 TXKP42681 527 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 CBX1P83916 185 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 DPYDQ12882 1025 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 AP3B2Q13367 1082 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 ANGEL2Q5VTE6 544 aaKnown RBP12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 DCAF15Q66K64 600 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 CABP7Q86V35 215 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 MTMR9Q96QG7 549 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 ZNF341Q9BYN7 854 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 ANO3Q9BYT9 981 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 GPRC5DQ9NZD1 345 aa12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 DDX25Q9UHL0 483 aaKnown RBP12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 ABT1Q9ULW3 272 aaKnown RBP12.89□□□□□ -0.35
PRAMEF11-201ENST00000619922 MEIS2O14770 477 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 PLA2G6O60733 806 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 GCFC2P16383 781 aaKnown RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 BMP6P22004 513 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 CASP1P29466 404 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 NCAPHQ15003 741 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 TPD52L1Q16890 204 aaPredicted RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 TMEM266Q2M3C6 531 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 CEP135Q66GS9 1140 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 STAMQ92783 540 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 CASP8AP2Q9UKL3 1982 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 MYL5Q02045 173 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 CST9Q5W186 159 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 TSC1Q92574 1164 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 HOOK2Q96ED9 719 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 GSDMAQ96QA5 445 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 BLZF1Q9H2G9 400 aa12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 ADARB2Q9NS39 739 aaKnown RBP12.88□□□□□ -0.35
PRAMEF11-201ENST00000619922 SPDYE3A6NKU9 549 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 MARCH6O60337 910 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 USP11P51784 963 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 PTPN14Q15678 1187 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 ZNF397Q8NF99 534 aaPredicted RBP12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 CAPNS2Q96L46 248 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 PLIN2Q99541 437 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 FAM53CQ9NYF3 392 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 TLL2Q9Y6L7 1015 aa12.87□□□□□ -0.35
PRAMEF11-201ENST00000619922 FOSP01100 380 aaPredicted RBP12.86□□□□□ -0.35
PRAMEF11-201ENST00000619922 CUL4BQ13620 913 aa12.86□□□□□ -0.35
PRAMEF11-201ENST00000619922 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
PRAMEF11-201ENST00000619922 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
PRAMEF11-201ENST00000619922 C16orf45Q96MC5 204 aaPredicted RBP12.86□□□□□ -0.35
PRAMEF11-201ENST00000619922 MTRQ99707 1265 aa12.86□□□□□ -0.35
PRAMEF11-201ENST00000619922 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
PRAMEF11-201ENST00000619922 GGA3Q9NZ52 723 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms