RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 ZEB2O60315 1214 aa25.4■■□□□ 1.66
TRAF4-217ENST00000618771 CDC45O75419 566 aa25.4■■□□□ 1.66
TRAF4-217ENST00000618771 CXCL17Q6UXB2 119 aa25.4■■□□□ 1.66
TRAF4-217ENST00000618771 TAAR1Q96RJ0 339 aa25.4■■□□□ 1.66
TRAF4-217ENST00000618771 LY9Q9HBG7 655 aa25.4■■□□□ 1.66
TRAF4-217ENST00000618771 GPHNQ9NQX3 736 aaPredicted RBP25.4■■□□□ 1.66
TRAF4-217ENST00000618771 TMEM39AQ9NV64 488 aa25.4■■□□□ 1.66
TRAF4-217ENST00000618771 PCDHA1Q9Y5I3 950 aa25.4■■□□□ 1.66
TRAF4-217ENST00000618771 ARVCFO00192 962 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 KIAA0355O15063 1070 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 CABYRO75952 493 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 CDK7P50613 346 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 FAAP100Q0VG06 881 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 PPP2R5BQ15173 497 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 ZNF654Q8IZM8 581 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 NSUN6Q8TEA1 469 aaKnown RBP25.39■■□□□ 1.66
TRAF4-217ENST00000618771 SCFD2Q8WU76 684 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 TMEM87BQ96K49 555 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 PIGSQ96S52 555 aa25.39■■□□□ 1.66
TRAF4-217ENST00000618771 PRUNE2Q8WUY3 3088 aa25.38■■□□□ 1.65
TRAF4-217ENST00000618771 CYTH3O43739 400 aa25.38■■□□□ 1.65
TRAF4-217ENST00000618771 DDAH1O94760 285 aa25.38■■□□□ 1.65
TRAF4-217ENST00000618771 CFBP00751 764 aa25.38■■□□□ 1.65
TRAF4-217ENST00000618771 SMAD3P84022 425 aaKnown RBP25.38■■□□□ 1.65
TRAF4-217ENST00000618771 RMDN3Q96TC7 470 aa25.38■■□□□ 1.65
TRAF4-217ENST00000618771 SH2B2O14492 632 aaPredicted RBP25.37■■□□□ 1.65
TRAF4-217ENST00000618771 OPLAHO14841 1288 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 RAG1P15918 1043 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 ITGB8P26012 769 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 HSD17B4P51659 736 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 TRAF1Q13077 416 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 RNF20Q5VTR2 975 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 CTCFLQ8NI51 663 aaPredicted RBP25.37■■□□□ 1.65
TRAF4-217ENST00000618771 MAP3K14Q99558 947 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 MYL10Q9BUA6 226 aa25.37■■□□□ 1.65
TRAF4-217ENST00000618771 MYH7BA7E2Y1 1941 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 VCANP13611 3396 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 NKRFO15226 690 aaKnown RBP eCLIP25.36■■□□□ 1.652e-7■■□□□ 11.4
TRAF4-217ENST00000618771 KIF5BP33176 963 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 GHRHRQ02643 423 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 COL9A3Q14050 684 aaPredicted RBP25.36■■□□□ 1.65
TRAF4-217ENST00000618771 ARHGEF16Q5VV41 709 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 NFXL1Q6ZNB6 911 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 TMTC2Q8N394 836 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 OR6J1Q8NGC5 347 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 IWS1Q96ST2 819 aa25.36■■□□□ 1.65
TRAF4-217ENST00000618771 TTYH1Q9H313 450 aaPredicted RBP25.36■■□□□ 1.65
TRAF4-217ENST00000618771 SCN10AQ9Y5Y9 1956 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 PNMA6FA0A0J9YX94 578 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 CCDC69A6NI79 296 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 NEFLP07196 543 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 TXNP10599 105 aaKnown RBP25.35■■□□□ 1.65
TRAF4-217ENST00000618771 CPT1AP50416 773 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 FAM126BQ8IXS8 530 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 MAFAQ8NHW3 353 aaPredicted RBP25.35■■□□□ 1.65
TRAF4-217ENST00000618771 MYLIPQ8WY64 445 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 MAP3K20Q9NYL2 800 aaKnown RBP25.35■■□□□ 1.65
TRAF4-217ENST00000618771 TBX21Q9UL17 535 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 CDH23Q9H251 3354 aa25.35■■□□□ 1.65
TRAF4-217ENST00000618771 TLR3O15455 904 aaKnown RBP25.34■■□□□ 1.65
TRAF4-217ENST00000618771 EIF2AK2P19525 551 aaKnown RBP25.34■■□□□ 1.65
TRAF4-217ENST00000618771 EPHB4P54760 987 aa25.34■■□□□ 1.65
TRAF4-217ENST00000618771 ITGA7Q13683 1181 aa25.34■■□□□ 1.65
TRAF4-217ENST00000618771 TTLL4Q14679 1199 aa25.34■■□□□ 1.65
TRAF4-217ENST00000618771 STXBP2Q15833 593 aa25.34■■□□□ 1.65
TRAF4-217ENST00000618771 SAMD3Q8N6K7 520 aa25.34■■□□□ 1.65
TRAF4-217ENST00000618771 RNPC3Q96LT9 517 aaKnown RBP25.34■■□□□ 1.65
TRAF4-217ENST00000618771 PXMP2Q9NR77 195 aa25.34■■□□□ 1.65
TRAF4-217ENST00000618771 ARIH2O95376 493 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 LIFRP42702 1097 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 BRDTQ58F21 947 aaPredicted RBP25.33■■□□□ 1.65
TRAF4-217ENST00000618771 SEPT14Q6ZU15 432 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 SLC43A3Q8NBI5 491 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 PIBF1Q8WXW3 757 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 COPS5Q92905 334 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 SPZ1Q9BXG8 430 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 POLR3EQ9NVU0 708 aa25.33■■□□□ 1.65
TRAF4-217ENST00000618771 HOXA13P31271 388 aaPredicted RBP25.32■■□□□ 1.64
TRAF4-217ENST00000618771 PSMC6P62333 389 aa25.32■■□□□ 1.64
TRAF4-217ENST00000618771 SEZ6LQ9BYH1 1024 aa25.32■■□□□ 1.64
TRAF4-217ENST00000618771 LRRC2Q9BYS8 371 aa25.32■■□□□ 1.64
TRAF4-217ENST00000618771 GRIN2DO15399 1336 aa25.32■■□□□ 1.64
TRAF4-217ENST00000618771 TIMP1P01033 207 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 NR3C2P08235 984 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 MYL3P08590 195 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 CALM1P0DP23 149 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 CALM2P0DP24 149 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 CALM3P0DP25 149 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 SMARCA1P28370 1054 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 GNAQP50148 359 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 FPGSQ05932 587 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 CCDC62Q6P9F0 684 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 RRP36Q96EU6 259 aaKnown RBP25.31■■□□□ 1.64
TRAF4-217ENST00000618771 NEK1Q96PY6 1258 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 LZTS2Q9BRK4 669 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 SLC12A7Q9Y666 1083 aa25.31■■□□□ 1.64
TRAF4-217ENST00000618771 GCOM1H8Y6P7 765 aaPredicted RBP25.3■■□□□ 1.64
TRAF4-217ENST00000618771 EIF3JO75822 258 aaKnown RBP25.3■■□□□ 1.64
TRAF4-217ENST00000618771 CD4P01730 458 aa25.3■■□□□ 1.64
TRAF4-217ENST00000618771 POLR2MP0CAP2 368 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms