RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 C1QTNF7Q9BXJ2 289 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 ARMT1Q9H993 441 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SKP1P63208 163 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SURF1Q15526 300 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 TEAD4Q15561 434 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 GEN1Q17RS7 908 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 KRT79Q5XKE5 535 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 ARMC6Q6NXE6 501 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SLC25A13Q9UJS0 675 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 PPFIA2O75334 1257 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 IGBP1P78318 339 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SEPT8Q92599 483 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 AHCYL2Q96HN2 611 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 USP26Q9BXU7 913 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 RMND1Q9NWS8 449 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 NFU1Q9UMS0 254 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 ERBB3P21860 1342 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 PKN1Q16512 942 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 AASDHQ4L235 1098 aaPredicted RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 KHDRBS2Q5VWX1 349 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 PRPF40BQ6NWY9 871 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 TTC23LQ6PF05 361 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 DEFB132Q7Z7B7 95 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SRBD1Q8N5C6 995 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 HAPLN3Q96S86 360 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 RIC8AQ9NPQ8 531 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 HERC5Q9UII4 1024 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L15C9J2P7 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L13C9JLJ4 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L11C9JVI0 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L18D6R9N7 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L22D6RA61 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L17D6RBQ6 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L19D6RCP7 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L20D6RJB6 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 RAD17O75943 681 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 USP17L24Q0WX57 530 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 TMEM67Q5HYA8 995 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 COPS6Q7L5N1 327 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SDCCAG8Q86SQ7 713 aaPredicted RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 CEP120Q8N960 986 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SCFD1Q8WVM8 642 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 SLC38A10Q9HBR0 1119 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 RIPOR2Q9Y4F9 1068 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 PRRG1O14668 218 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 RNMTO43148 476 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 S100BP04271 92 aaPredicted RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 AGBL3Q8NEM8 1001 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 XPO6Q96QU8 1125 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 MYOZ2Q9NPC6 264 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 RPRD1BQ9NQG5 326 aaKnown RBP3.71□□□□□ -1.82
LPP-220ENST00000617246 HMG20BQ9P0W2 317 aa3.71□□□□□ -1.82
LPP-220ENST00000617246 GRXCR2A6NFK2 248 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 AP1B1Q10567 949 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CNNM3Q8NE01 707 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 FAM81BQ96LP2 452 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ZNF560Q96MR9 790 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CSRNP2Q9H175 543 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 TPX2Q9ULW0 747 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 C21orf59P57076 290 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 M0QYT0 321 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 RPL13P26373 211 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 POLA2Q14181 598 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 DNAJC21Q5F1R6 531 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 GPR161Q8N6U8 529 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 VAT1LQ9HCJ6 419 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CFAP45Q9UL16 551 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CYP46A1Q9Y6A2 500 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 H7C4K7 107 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CFBP00751 764 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 PPP1R2P3Q6NXS1 205 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ZNF711Q9Y462 761 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 F6X3S4 739 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 DYRK3O43781 588 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 TRPA1O75762 1119 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 LIG4P49917 911 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CYP4A22Q5TCH4 519 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 SEPT10Q9P0V9 454 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CDC45O75419 566 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 ALDH1L1O75891 902 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 EGFRP00533 1210 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 MAP2K2P36507 400 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 STXBP2Q15833 593 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 DUS1LQ6P1R4 473 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 ZNF248Q8NDW4 579 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 SSH3Q8TE77 659 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 MAK16Q9BXY0 300 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 PARP2Q9UGN5 583 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CNTNAP4Q9C0A0 1308 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 RREB1Q92766 1687 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 RFX7Q2KHR2 1363 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CTSWP56202 376 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 PHEXP78562 749 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 RESTQ13127 1097 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 FAM98AQ8NCA5 519 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 CCDC68Q9H2F9 335 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CREBZFQ9NS37 354 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 CPSF3Q9UKF6 684 aaKnown RBP3.7□□□□□ -1.82
LPP-220ENST00000617246 GSTTP1A0A1W2PQM5 241 aa3.7□□□□□ -1.82
LPP-220ENST00000617246 SPDYE2BA6NHP3 402 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms