RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 APBA1Q02410 837 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 ALX1Q15699 326 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 ODR4Q5SWX8 454 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 KLHL7Q8IXQ5 586 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 RRAGDQ9NQL2 400 aaPredicted RBP10□□□□□ -0.81
SPTBN1-207ENST00000615901 TMEM131LA2VDJ0 1609 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 ZNF827Q17R98 1081 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 EXOC3L4Q17RC7 722 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 TMTC3Q6ZXV5 915 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 NSMCE1Q8WV22 266 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 TUBGCP2Q9BSJ2 902 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 PLA2G12BQ9BX93 195 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 NLRC4Q9NPP4 1024 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 SRPRBQ9Y5M8 271 aaKnown RBP10□□□□□ -0.81
SPTBN1-207ENST00000615901 YARSP54577 528 aaKnown RBP10□□□□□ -0.81
SPTBN1-207ENST00000615901 UAP1Q16222 522 aaPredicted RBP10□□□□□ -0.81
SPTBN1-207ENST00000615901 RESP18Q5W5W9 173 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 FAM160B2Q86V87 743 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 METTL13Q8N6R0 699 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 DESI2Q9BSY9 194 aa10□□□□□ -0.81
SPTBN1-207ENST00000615901 NSFP46459 744 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PDZD4Q76G19 769 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PSMD1Q99460 953 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PDE4DIPQ5VU43 2346 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 KRIT1O00522 736 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 ETF1P62495 437 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 KCTD2Q14681 263 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 ARHGAP44Q17R89 818 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 NACC1Q96RE7 527 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 CPDO75976 1380 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 ADGRB1O14514 1584 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 NDUFAB1O14561 156 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PPM1FP49593 454 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 MFAP3P55082 362 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 AP3B2Q13367 1082 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 MIS18BP1Q6P0N0 1132 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 STRBPQ96SI9 672 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 RPS6KA4O75676 772 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PIK3CAP42336 1068 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 ZNF579Q8NAF0 562 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 ZNF335Q9H4Z2 1342 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 USP42Q9H9J4 1324 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 CRCPO75575 148 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 TTC31Q49AM3 519 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 BPIFA3Q9BQP9 254 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 VWDEQ8N2E2 1590 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 USP17L3A6NCW0 530 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 USP17L4A6NCW7 530 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 BMP3P12645 472 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 POLR2BP30876 1174 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 LRRC63Q05C16 580 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 MAN2A1Q16706 1144 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 CCDC93Q567U6 631 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 USP17L1Q7RTZ2 530 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 TSC1Q92574 1164 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 ZNF577Q9BSK1 485 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PCDHA5Q9Y5H7 936 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 GOLGA8KD6RF30 607 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 NR2F2P24468 414 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 U2AF2P26368 475 aaKnown RBP eCLIP9.99□□□□□ -0.812e-7■■□□□ 12.6
SPTBN1-207ENST00000615901 PI16Q6UXB8 463 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 ACCSQ96QU6 501 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 HNRNPDLO14979 420 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 VIMP08670 466 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 DYNLL1P63167 89 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PIGSQ96S52 555 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 TMEM206Q9H813 350 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 TYW1Q9NV66 732 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 BCS1LQ9Y276 419 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 PASKQ96RG2 1323 aa9.99□□□□□ -0.81
SPTBN1-207ENST00000615901 RASA3Q14644 834 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 MASTLQ96GX5 879 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 DDX41Q9UJV9 622 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 RNASE9P60153 205 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 SLC27A3Q5K4L6 730 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 CCDC62Q6P9F0 684 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 PRKAB2O43741 272 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 SARNPP82979 210 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 KRT81Q14533 505 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 SUPT20HL1Q3ZLR7 823 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 SPATS2Q86XZ4 545 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 TBCKQ8TEA7 893 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 RABGGTAQ92696 567 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 STMN2Q93045 179 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 PANX2Q96RD6 677 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 ZNF408Q9H9D4 720 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 USTQ9Y2C2 406 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 VSTM4Q8IW00 320 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 PPP1R13BQ96KQ4 1090 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 ATP11AP98196 1134 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 DPCR1Q3MIW9 517 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 SUSD4Q5VX71 490 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 GADL1Q6ZQY3 521 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 TRERF1Q96PN7 1200 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 TRIM31Q9BZY9 425 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 GINS2Q9Y248 185 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 EPN1Q9Y6I3 576 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 THAP12O43422 761 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 GMNNO75496 209 aa9.98□□□□□ -0.81
SPTBN1-207ENST00000615901 AFPP02771 609 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms