RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 MYH1P12882 1939 aa21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 FOCADQ5VW36 1801 aa21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 GOLGA6CA6NDK9 693 aa21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 PRPF3O43395 683 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 PARP1P09874 1014 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 GOLGA6DP0CG33 693 aa21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 MYBL2P10244 700 aa21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 TNFRSF25Q93038 417 aa21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 GOLGA6AQ9NYA3 693 aa21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 ATF5Q9Y2D1 282 aaPredicted RBP21.26■□□□□ 0.99
SEMA3B-210ENST00000611067 LGALS16A8MUM7 142 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 MEA1Q16626 185 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 DACT2Q5SW24 774 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 IQCEQ6IPM2 695 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 IRF2BP1Q8IU81 584 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 KIAA0825Q8IV33 1275 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 GDAP1L1Q96MZ0 367 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 DEF6Q9H4E7 631 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 KAT14Q9H8E8 782 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 GEMIN8Q9NWZ8 242 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 GOLGA6BA6NDN3 693 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 ZMYND10O75800 440 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 KCNA3P22001 575 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 FUT2Q10981 343 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 PICALMQ13492 652 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 MMS22LQ6ZRQ5 1243 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 KIAA1328Q86T90 577 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 ZNF444Q8N0Y2 327 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 ZNF507Q8TCN5 953 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 FAM184BQ9ULE4 1060 aa21.25■□□□□ 0.99
SEMA3B-210ENST00000611067 RPN1P04843 607 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 CALM1P0DP23 149 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 CALM2P0DP24 149 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 CALM3P0DP25 149 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 PRCPP42785 496 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 IRAK1P51617 712 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 TFAP4Q01664 338 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 PPFIA1Q13136 1202 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 MICALL1Q8N3F8 863 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 CAGE1Q8TC20 777 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 PSMD1Q99460 953 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 USP40Q9NVE5 1235 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 TFR2Q9UP52 801 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 CYLC1P35663 651 aaPredicted RBP21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 CRKP46108 304 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 TGFB2P61812 414 aa21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 GSPT2Q8IYD1 628 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 AENQ8WTP8 325 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-210ENST00000611067 EBAG9O00559 213 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 NMT2O60551 498 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 TSPY3P0CV98 308 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 TSPY8P0CW00 308 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 EEF1GP26641 437 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 SOGA3Q5TF21 947 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 GBP6Q6ZN66 633 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 GDAQ9Y2T3 454 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 ADAMTSL1Q8N6G6 1762 aa21.23■□□□□ 0.99
SEMA3B-210ENST00000611067 PDE2AO00408 941 aaPredicted RBP21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 DDAH1O94760 285 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 NPY5RQ15761 445 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 CCDC178Q5BJE1 867 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 CCDC70Q6NSX1 233 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 C16orf86Q6ZW13 317 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 SLC44A5Q8NCS7 719 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 RUBCNQ92622 972 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 PURBQ96QR8 312 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 PIM2Q9P1W9 311 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 CCT5P48643 541 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 CCDC170Q8IYT3 715 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 DRC1Q96MC2 740 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 MRIQ9BWK5 157 aa21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 RBM28Q9NW13 759 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 V9GY48 417 aaPredicted RBP21.22■□□□□ 0.99
SEMA3B-210ENST00000611067 ERLIN2O94905 339 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 RBM5P52756 815 aaKnown RBP eCLIP21.21■□□□□ 0.993e-6■■□□□ 12.7
SEMA3B-210ENST00000611067 HDLBPQ00341 1268 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 SKIDA1Q1XH10 827 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 ADSSL1Q8N142 457 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 ZDHHC15Q96MV8 337 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 CAPS2Q9BXY5 557 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 LACRTQ9GZZ8 138 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 MAPK8IP1Q9UQF2 711 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 hCG_1642624A0A1W2PR95 340 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 ZNF185O15231 689 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 IPO7O95373 1038 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 CDK8P49336 464 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 R3HDM1Q15032 1099 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 APOBEC3HQ6NTF7 200 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 CDC42EP5Q6NZY7 148 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 MMGT1Q8N4V1 131 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 THAP9Q9H5L6 903 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 FAM169AQ9Y6X4 670 aa21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 ZNF646O15015 1829 aaPredicted RBP21.21■□□□□ 0.99
SEMA3B-210ENST00000611067 TRIM49BA6NDI0 452 aa21.2■□□□□ 0.98
SEMA3B-210ENST00000611067 RCCD1A6NED2 376 aa21.2■□□□□ 0.98
SEMA3B-210ENST00000611067 GOLGA8KD6RF30 607 aa21.2■□□□□ 0.98
SEMA3B-210ENST00000611067 IDEP14735 1019 aa21.2■□□□□ 0.98
SEMA3B-210ENST00000611067 TRAPPC10P48553 1259 aa21.2■□□□□ 0.98
SEMA3B-210ENST00000611067 DNM2P50570 870 aa21.2■□□□□ 0.98
SEMA3B-210ENST00000611067 TROAPQ12815 778 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms