RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 VAT1LQ9HCJ6 419 aa11.94□□□□□ -0.5
LINC01954-201ENST00000607419 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 GRXCR1A8MXD5 290 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 DEXIO95424 95 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 HOXC6P09630 235 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 PBX2P40425 430 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 TLE2Q04725 743 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 SLC35G1Q2M3R5 365 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 GTF3C2Q8WUA4 911 aaPredicted RBP11.93□□□□□ -0.5
LINC01954-201ENST00000607419 WASF1Q92558 559 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 PHKBQ93100 1093 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
LINC01954-201ENST00000607419 SLC26A6Q9BXS9 759 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
LINC01954-201ENST00000607419 ZNF576Q9H609 170 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
LINC01954-201ENST00000607419 SEC63Q9UGP8 760 aaKnown RBP11.93□□□□□ -0.5
LINC01954-201ENST00000607419 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 SMC3Q9UQE7 1217 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
LINC01954-201ENST00000607419 V9GY48 417 aaPredicted RBP11.93□□□□□ -0.5
LINC01954-201ENST00000607419 MYH15Q9Y2K3 1946 aa11.93□□□□□ -0.5
LINC01954-201ENST00000607419 PNMA6FA0A0J9YX94 578 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 SLC15A5A6NIM6 579 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
LINC01954-201ENST00000607419 ZBTB5O15062 677 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 COBLO75128 1261 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 ZBED4O75132 1171 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 DNAJB2P25686 324 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 TRAF1Q13077 416 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 GRB14Q14449 540 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 LRRC41Q15345 812 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
LINC01954-201ENST00000607419 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 HOMER1Q86YM7 354 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 ATG4CQ96DT6 458 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 FAM122AQ96E09 287 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 ASB2Q96Q27 587 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 PIGSQ96S52 555 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 SLC38A10Q9HBR0 1119 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
LINC01954-201ENST00000607419 RABGAP1Q9Y3P9 1069 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 ZNF236Q9UL36 1845 aa11.92□□□□□ -0.5
LINC01954-201ENST00000607419 hCG_1984214I3L0E3 225 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 VWA5AO00534 786 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 JAK2O60674 1132 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 SCG2P13521 617 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 FDPSP14324 419 aaKnown RBP11.91□□□□□ -0.5
LINC01954-201ENST00000607419 OAZ1P54368 228 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
LINC01954-201ENST00000607419 PFKFB3Q16875 520 aaPredicted RBP11.91□□□□□ -0.5
LINC01954-201ENST00000607419 QRICH1Q2TAL8 776 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 WDR78Q5VTH9 848 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 C16orf59Q7L2K0 433 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 CCAR1Q8IX12 1150 aaKnown RBP11.91□□□□□ -0.5
LINC01954-201ENST00000607419 ZNF713Q8N859 430 aaPredicted RBP11.91□□□□□ -0.5
LINC01954-201ENST00000607419 FAM184AQ8NB25 1140 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 PIBF1Q8WXW3 757 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 DDX11Q96FC9 970 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 RNPC3Q96LT9 517 aaKnown RBP11.91□□□□□ -0.5
LINC01954-201ENST00000607419 TCHHQ07283 1943 aa11.91□□□□□ -0.5
LINC01954-201ENST00000607419 MYH7BA7E2Y1 1941 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 hCG_1642624A0A1W2PR95 340 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 ATP2A1O14983 1001 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 GJB2P29033 226 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 PKN1Q16512 942 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 C1orf53Q5VUE5 145 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 CCDC174Q6PII3 467 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 ARRDC4Q8NCT1 418 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 REPS2Q8NFH8 660 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 IPO9Q96P70 1041 aaKnown RBP11.9□□□□□ -0.5
LINC01954-201ENST00000607419 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 PRDM12Q9H4Q4 367 aa11.9□□□□□ -0.5
LINC01954-201ENST00000607419 ZNF536O15090 1300 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 MSCO60682 206 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 PPFIA3O75145 1194 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 ICAM1P05362 532 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 XBP1P17861 261 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 SLC4A3P48751 1232 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 SNAP25P60880 206 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 CCDC12Q8WUD4 166 aaPredicted RBP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 ATXN2LQ8WWM7 1075 aaKnown RBP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 CWC22Q9HCG8 908 aaKnown RBP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
LINC01954-201ENST00000607419 ZNF214Q9UL59 606 aaPredicted RBP11.89□□□□□ -0.51
LINC01954-201ENST00000607419 ABCB11O95342 1321 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms