RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CCNE1P24864 410 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 RBM10P98175 930 aaKnown RBP22.24■■□□□ 1.15
MMP28-201ENST00000605424 RBL2Q08999 1139 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 TRAF1Q13077 416 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 FKBP1CQ5VVH2 108 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 TTI2Q6NXR4 508 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 OGFOD1Q8N543 542 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 FAM151AQ8WW52 585 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 PNMA5Q96PV4 448 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 PHLPP2Q6ZVD8 1323 aa22.24■■□□□ 1.15
MMP28-201ENST00000605424 MFAP3LO75121 409 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 GH2P01242 217 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 BMP3P12645 472 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 TMEM119Q4V9L6 283 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 SYDE2Q5VT97 1194 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 IRF2BP1Q8IU81 584 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 SNX29Q8TEQ0 813 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 HAS1Q92839 578 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 MBOAT7Q96N66 472 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 SPON1Q9HCB6 807 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 MAGEC2Q9UBF1 373 aaPredicted RBP22.23■■□□□ 1.15
MMP28-201ENST00000605424 PCDHA12Q9UN75 941 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 FOSP01100 380 aaPredicted RBP22.23■■□□□ 1.15
MMP28-201ENST00000605424 FECHP22830 423 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 CCT6AP40227 531 aaKnown RBP22.23■■□□□ 1.15
MMP28-201ENST00000605424 DLGAP5Q15398 846 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 SHROOM1Q2M3G4 852 aaPredicted RBP22.23■■□□□ 1.15
MMP28-201ENST00000605424 HYIQ5T013 277 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 UNC13DQ70J99 1090 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 FBXO11Q86XK2 927 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 FAM114A1Q8IWE2 563 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 LARGE2Q8N3Y3 721 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 RAD54LQ92698 747 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 P2RX5Q93086 422 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 TRIM47Q96LD4 638 aa22.23■■□□□ 1.15
MMP28-201ENST00000605424 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.23■■□□□ 1.15
MMP28-201ENST00000605424 KDM3AQ9Y4C1 1321 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 MYH7BA7E2Y1 1941 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 A0A1W2PQC6 194 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 MARCH6O60337 910 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 MMP14P50281 582 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 ANO3Q9BYT9 981 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 NT5C3AQ9H0P0 336 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 VPS16Q9H269 839 aa22.22■■□□□ 1.15
MMP28-201ENST00000605424 SLFN12Q8IYM2 578 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 MTMR14Q8NCE2 650 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 SRRTQ9BXP5 876 aaKnown RBP22.21■■□□□ 1.15
MMP28-201ENST00000605424 L2HGDHQ9H9P8 463 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 TAB2Q9NYJ8 693 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 ZNF70Q9UC06 446 aaPredicted RBP22.21■■□□□ 1.15
MMP28-201ENST00000605424 KIF13BQ9NQT8 1826 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 TRIM49BA6NDI0 452 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 POTEMA6NI47 508 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 PSMD14O00487 310 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 MEIS2O14770 477 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 GYPCP04921 128 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 PMS1P54277 932 aaKnown RBP22.21■■□□□ 1.15
MMP28-201ENST00000605424 PSMD2Q13200 908 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 SYT10Q6XYQ8 523 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 KCNMB3Q9NPA1 279 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 UTRNP46939 3433 aa22.21■■□□□ 1.15
MMP28-201ENST00000605424 LGALS16A8MUM7 142 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L15C9J2P7 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L13C9JLJ4 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L11C9JVI0 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L18D6R9N7 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L22D6RA61 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L17D6RBQ6 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L19D6RCP7 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L20D6RJB6 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 COBLO75128 1261 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 KCNA3P22001 575 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L24Q0WX57 530 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 STK4Q13043 487 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 SPDYE2Q495Y8 402 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 TRIM65Q6PJ69 517 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 FOXR2Q6PJQ5 311 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 USP17L6PQ6QN14 398 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 CSGALNACT2Q8N6G5 542 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 AGBL3Q8NEM8 1001 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 CRYGNQ8WXF5 182 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 ANKRD7Q92527 254 aa22.2■■□□□ 1.14
MMP28-201ENST00000605424 PPP1R1BQ9UD71 204 aaPredicted RBP22.2■■□□□ 1.14
MMP28-201ENST00000605424 MYMKA6NI61 221 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 TBX3O15119 743 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 TBC1D12O60347 775 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 CASP14P31944 242 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 MCM6Q14566 821 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 DUSP9Q99956 384 aaKnown RBP22.19■■□□□ 1.14
MMP28-201ENST00000605424 STK24Q9Y6E0 443 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 TCP10L2B9ZVM9 353 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 DNM2P50570 870 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 JAG1P78504 1218 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 UBXN1Q04323 297 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 IKQ13123 557 aaPredicted RBP22.19■■□□□ 1.14
MMP28-201ENST00000605424 TMTC1Q8IUR5 882 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 ZNF710Q8N1W2 664 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 TMX2Q9Y320 296 aa22.19■■□□□ 1.14
MMP28-201ENST00000605424 RAD17O75943 681 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms